Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq44 150 4e-31 >seq44 Length=686090 Score = 150 bits (166), Expect = 4e-31 Identities = 305/447 (68%), Gaps = 13/447 (3%) Strand=Plus/Minus Query 101914 AATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTT 101973 |||||| || |||||||| ||||| || || |||||| ||| || ||| | ||||| Sbjct 254935 AATTGTAGCTTTTGCTGCTGTTGAGGGCATTTTCTTTTCTGGCAGTTTTGCAGCAATTTT 254876 Query 101974 CTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAG 102033 |||| |||| || |||||| || ||||||| | |||| || |||||||| ||||| || Sbjct 254875 CTGGCTCAAAAAGAGGGGTCTTATGCCTGGCTTAACCTTTTCAAATGAGTTAATTTCAAG 254816 Query 102034 GGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATAC 102093 ||| |||||||| || | || ||||| || | |||| | |||| | | Sbjct 254815 GGATGAAGGTCTACACTGTGATTTTGCTTGTTTAATGTTCTCCTACC---TTGTACAAAA 254759 Query 102094 CCCATCAAGAGAAAG---GATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGA 102150 || |||| ||||| || | |||| | || || || ||||||||||| Sbjct 254758 ACCTTCAAAGGAAAGAGTGACAAGTATAATTCGC---GATGCTGTAATCATTGAACAAGA 254702 Query 102151 ATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCA 102210 ||| ||||| | | | | || || | ||| | || ||||| || || || ||| | || Sbjct 254701 ATTCCTCACTGATGCTTTACCAGTGAGTTTAATTGGCATGAATTGTAAATTAATGTGTCA 254642 Query 102211 GTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAA 102270 || ||||| |||||||| |||| | ||||| ||| |||| || ||| ||||| Sbjct 254641 ATATATTGAGTTTGTGGCTGATAGATTATTGACAGAATTGGGGTGTGAGAAGATTTATAA 254582 Query 102271 TGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGA--ATAAGACCAACTTT 102328 |||| || || || ||||| ||||||| || || ||| || || ||||| Sbjct 254581 TGTTGTAAATCCTTTTGATTTCAT-GACAATA-ATCTCTACAGATGGAAAAACAAACTTC 254524 Query 102329 TTTGAAAAGAGAGTCGCCGAGTATCAA 102355 |||||||||| ||| | || |||||| Sbjct 254523 TTTGAAAAGAAAGTTGGAGAATATCAA 254497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989545164085165