Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq286 100 2e-16 >seq286 Length=205596 Score = 100 bits (110), Expect = 2e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 ||||| || || |||| || || || |||||||| || |||||||| || || || || Sbjct 27022 GTGACATGCGCAATCATGTAAGTAAGCAGGGCGTAACTTGCGATGTTGAAAGGCACGCCC 27081 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAA 21116 | |||||||||||||| | |||||||| | ||| |||| || | || ||| | Sbjct 27082 AAACCCATGTCGGCGGAACGCTGGTACAACATGCACGACAATTCGTCGTTGGCGACGAAG 27141 Query 21117 AACTGACACAAAAC-GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCA 21175 ||||| ||| | || |||||| || || | ||||||| || | ||| |||||||| Sbjct 27142 AACTG-CACGAGACAGTGACAGGGGGGCAAAGCCATCTCCGGCAAGTCTATTGGGTTCCA 27200 Query 21176 CGCGCACAT 21184 |||||||| Sbjct 27201 TGCGCACAT 27209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427760030988240