Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq44 178 2e-39 seq308 154 2e-32 seq97 154 2e-32 seq286 84.2 3e-11 >seq44 Length=686090 Score = 178 bits (196), Expect = 2e-39 Identities = 552/851 (65%), Gaps = 24/851 (3%) Strand=Plus/Minus Query 125016 GACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGAT 125075 || ||||||| | ||||| | || | ||||| |||||||| ||||| || || Sbjct 255342 GATATTTGGGCCAAATACAAGGAAGCAGAAGCCTCATTTTGGACAACAGAAGAAGTGGAC 255283 Query 125076 CTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATA 125135 |||||||||| ||| | |||||| | | | || || | ||| | | || || Sbjct 255282 TTGTCCAAGGATCTGGATCATTGGGTCAAGC---TAACAGACAATGAAAGGCACTTCATC 255226 Query 125136 TCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACA 125195 || ||| | | || |||||||||| ||| ||||| || || ||||| || | || | Sbjct 255225 TCCCACGTCCTTGCTTTCTTTGCCGCCTCTGATGGTATTGTGAACGAGAACTTAGTGGAA 255166 Query 125196 CGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATG 125255 || ||| ||||| || | | || | ||||||||| ||||| ||||| Sbjct 255165 CGGTTCAGCCAAGAAGTGCAGGTCACTGAAGCTAGGTGCTTTTATGGATTTCAAATTGCC 255106 Query 125256 ATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG 125315 |||||||| | ||||| ||||||||| | || ||||| | ||||| | |||||| Sbjct 255105 ATTGAGAATATCCACTCTGAAATGTACAGCATGCTAATTGAAACTTACATCAGTGATCCG 255046 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375 | | ||| | | || || || || || || || | || | | | || |||||| Sbjct 255045 GATCAAAAAGAATTTCTTTTCAATGCCATTGAAACATTACCTTGTGTTAAAAAGAAGGCT 254986 Query 125376 CAATGGGTGATTCGGTGGATCG-----ATGACGACAAGTCTTCGTACGCCGACAGACTGG 125430 |||||| | |||||| | || | ||| || || || ||| | | Sbjct 254985 GAATGGGCATTGAACTGGATCAGCAGCAAGAATGCCAGTTTTGGT-----GAGAGAATTG 254931 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490 | || || || || || |||||||| |||||||| || |||||||| || || || |||| Sbjct 254930 TAGCTTTTGCTGCTGTTGAGGGCATTTTCTTTTCTGGCAGTTTTGCAGCAATTTTCTGGC 254871 Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550 |||| ||| | || || ||||| || | || || ||||| || || | || | Sbjct 254870 TCAAAAAGAGGGGTCTTATGCCTGGCTTAACCTTTTCAAATGAGTTAATTTCAAGGGATG 254811 Query 125551 AGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCA 125610 | || ||||||||||| ||||| | || |||| | ||| || || | | Sbjct 254810 AAGGTCTACACTGTGATTTTGCTTGTTTAATGTT---CTCCTACCTT-GTACAAA----- 254760 Query 125611 GATCCAGCGATGAAAAG-GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAG 125669 | || | | | |||| || | | || | |||||| || | || |||||||| Sbjct 254759 -AACCTTCAAAGGAAAGAGTGACAAGTATAATTCGCGATGCTGTAATCATTGAACAAGAA 254701 Query 125670 TTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGCGAG 125729 || || || || | |||| || || | ||||||||||| || || ||||||| | Sbjct 254700 TTCCTCACTGATGCTTTACCAGTGAGTTTAATTGGCATGAATTGTAAATTAATGTGTCAA 254641 Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAAC 125789 || || ||||||||||| ||| | || || || ||| | |||||||| || Sbjct 254640 TATATTGAGTTTGTGGCTGATAGATTATTGACAGAATTGGGGTGTGAGAAGATTTATAAT 254581 Query 125790 GCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTC 125849 | ||||| |||||||||||||| | || || ||| || || || ||||| || Sbjct 254580 GTTGTAAATCCTTTTGATTTCATGACAATAATCTCTACAGATGGAAAAACAAACTTCTTT 254521 Query 125850 GAGAAGAAGGT 125860 || ||||| || Sbjct 254520 GAAAAGAAAGT 254510 >seq308 Length=193707 Score = 154 bits (170), Expect = 2e-32 Identities = 338/504 (67%), Gaps = 2/504 (0%) Strand=Plus/Minus Query 96831 GTGCCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGGCAATAA 96889 ||||| ||||| ||| | | ||| || | || ||||||| || || ||||| || Sbjct 6625 GTGCCCATGCTTAGAGTTTTCAACAACACCGCCA-GATACGTCGACCAAGGAGGCAACAA 6567 Query 96890 ACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTAT 96949 | | || || ||| | ||| |||| |||||||| |||||||| || | ||| | ||| | Sbjct 6566 AAGACCTGGAGCTTTTGCCATCTATTTGGAACCATGGCACGCAGATATCTTTCAGTTTTT 6507 Query 96950 CGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACT 97009 || || || ||| | || |||||| || || || |||||||| ||||| | Sbjct 6506 GGATCTGAAAAAGAACACGGGTAAAGAAGAGTACCGCGCTAGAGACTTGTTCTATGCCTT 6447 Query 97010 CTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTG 97069 ||| | || |||||||| ||||| ||||| | | ||| ||| | | ||||| Sbjct 6446 GTGGATCCCGGATTTGTTTATGAAACGCGTTGAAACCAACGGCACTTGGTCCTTGATGTG 6387 Query 97070 CCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACAC 97129 ||| | ||| |||||||| |||||||||||||||| |||| |||| ||||| Sbjct 6386 CCCGCATCAGTCCCCCGGTCTTGCCGATTGCTGGGGCGAGAAGTTCGAGGAATTGTACAT 6327 Query 97130 GGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAACTGTGGAAGGC 97189 | ||||| |||| || || ||| || ||| || | | |||||||| || Sbjct 6326 GAAATACGAAGAAGAAGGTAAATTCGTCGAACAAGTGCCAGCGCAAAAACTGTGGCGTGC 6267 Query 97190 CATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAA 97249 ||| | || | ||||| || ||||| || || ||||| | ||||| || || || Sbjct 6266 CATTATTGCGTCACAGGTCGAAACTGGCACACCTTACATGTTGTACAAAGACGCCTGTAA 6207 Query 97250 TCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAAT 97309 | || |||||||||| |||| ||||| |||| | || |||||||||| || Sbjct 6206 CAGAAAAAGCAACCAACAAAACTTAGGCACGATCAGAAGTAGTAACTTGTGCACGGAGAT 6147 Query 97310 TGTAGAGTACGCCTCTCCGGACGA 97333 | || || | ||||| || || Sbjct 6146 CATTGAATATACGTCTCCTGATGA 6123 >seq97 Length=492714 Score = 154 bits (170), Expect = 2e-32 Identities = 338/504 (67%), Gaps = 2/504 (0%) Strand=Plus/Plus Query 96831 GTGCCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGGCAATAA 96889 ||||| ||||| ||| | | ||| || | || ||||||| || || ||||| || Sbjct 9765 GTGCCCATGCTTAGAGTTTTCAACAACACCGCCA-GATACGTCGACCAAGGAGGCAACAA 9823 Query 96890 ACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTTTAT 96949 | | || || ||| | ||| |||| |||||||| |||||||| || | ||| | ||| | Sbjct 9824 AAGACCTGGAGCTTTTGCCATCTATTTGGAACCATGGCACGCAGATATCTTTCAGTTTTT 9883 Query 96950 CGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTATGCACT 97009 || || || ||| | || |||||| || || || |||||||| ||||| | Sbjct 9884 GGATCTGAAAAAGAACACGGGTAAAGAAGAGTACCGCGCTAGAGACTTGTTCTATGCCTT 9943 Query 97010 CTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTG 97069 ||| | || |||||||| ||||| ||||| | | ||| ||| | | ||||| Sbjct 9944 GTGGATCCCGGATTTGTTTATGAAACGCGTTGAAACCAACGGCACTTGGTCCTTGATGTG 10003 Query 97070 CCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACAC 97129 ||| | ||| |||||||| |||||||||||||||| |||| |||| ||||| Sbjct 10004 CCCGCATCAGTCCCCCGGTCTTGCCGATTGCTGGGGCGAGAAGTTCGAGGAATTGTACAT 10063 Query 97130 GGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACGAGAACTGTGGAAGGC 97189 | ||||| |||| || || ||| || ||| || | | |||||||| || Sbjct 10064 GAAATACGAAGAAGAAGGTAAATTCGTCGAACAAGTGCCAGCGCAAAAACTGTGGCGTGC 10123 Query 97190 CATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAA 97249 ||| | || | ||||| || ||||| || || ||||| | ||||| || || || Sbjct 10124 CATTATTGCGTCACAGGTCGAAACTGGCACACCTTACATGTTGTACAAAGACGCCTGTAA 10183 Query 97250 TCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAAT 97309 | || |||||||||| |||| ||||| |||| | || |||||||||| || Sbjct 10184 CAGAAAAAGCAACCAACAAAACTTAGGCACGATCAGAAGTAGTAACTTGTGCACGGAGAT 10243 Query 97310 TGTAGAGTACGCCTCTCCGGACGA 97333 | || || | ||||| || || Sbjct 10244 CATTGAATATACGTCTCCTGATGA 10267 >seq286 Length=205596 Score = 84.2 bits (92), Expect = 3e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 70193 AATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATG 70252 || || || ||| | ||||| |||||||| ||||||| || ||| |||| | ||| Sbjct 27233 AAACCGACTGATCGCAGGATGATAATGTGCGCATGGAACCCAATAGACTTGCCGGAGATG 27174 Query 70253 GCACTACCACCGTGTCACTGTTTGGCTCAGTTTTAC-TCGTACGATGGCAAATTGTCATG 70311 || | || || ||||||||| | | ||||| | | ||| | | | | ||||||| || Sbjct 27173 GCTTTGCCCCCCTGTCACTGTCTCGTGCAGTTCTTCGTCGC-CAACGACGAATTGTCGTG 27115 Query 70312 CTTAATGTATCAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTA 70371 | | |||| ||| | ||||||||||| | || || || || ||||| ||||| || Sbjct 27114 CATGTTGTACCAGCGTTCCGCCGACATGGGTTTGGGCGTGCCTTTCAACATCGCAAGTTA 27055 Query 70372 TTCTATGTTGACGCACATGATTGCTCACATTACCG 70406 | || | || |||||||||| || | |||| Sbjct 27054 CGCCCTGCTTACTTACATGATTGCGCATGTCACCG 27020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741030826695880