Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq5 116 3e-21 seq66 104 2e-17 >seq5 Length=1768869 Score = 116 bits (128), Expect = 3e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||| | || | ||| |||||||| | |||| |||||||| ||||| || || | Sbjct 907599 CCTCCACGTAAGCGTAAAACCAAATGCAACGTGGATTCTTTTTGTATATTGTAGTC-TGA 907657 Query 43955 AATTG-ACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | ||| |||| ||||||||||| || ||||| ||||| ||||| ||||| | || Sbjct 907658 AAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGGTCTGGTGG 907717 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||||||||||| ||||| ||| || | ||| ||||| | || ||||| Sbjct 907718 AATACCTTCTTTATCTTGGATTTTCGCTTTTACGTTTTCAATGGTATCAGAGGGTTCCAC 907777 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || || || || | || |||||||| |||||||| Sbjct 907778 TTCCAAAGTGATCGTCTTTCCTGTGAGGGTTTTCACAAAAATTTGCAT 907825 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 |||||||||||||| | ||||| || || ||| || ||||| ||||| || || | Sbjct 910335 ACCTCCTCTCAATCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTC--T 910392 Query 43954 TAATTGACGCT--CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGA 44011 || | || |||| || | |||||| || ||||| |||| ||||| ||||| | Sbjct 910393 GAAAGGGTCCTGCCATCTTCAAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGGTCTGGG 910452 Query 44012 GGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCC 44071 || | |||||| ||||| ||||| |||||| | ||| || || | || || Sbjct 910453 GGGATACCTTCCTTATCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCAGAAGGTTCA 910512 Query 44072 ACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || || | |||||||||||||| || ||||| || ||||| || ||||| Sbjct 910513 ACCTCCAAAGTAATTGTTTTACCAGTCAAAGTTTTTACAAAGATCTGCAT 910562 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | ||| | |||||||| || || || ||||| || |||||||| Sbjct 910564 CCTCCTCGAAGTCTCAGTACCAAATGCAGTGTAGATTCCTTTTGGATGTTATAATCAGAC 910623 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 || || | || || | |||||| || ||||| |||| ||||| || || | || Sbjct 910624 AAGGTGCGTCCGTCTTCTAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGGGGA 910683 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | |||||||||||| ||||||| || || | ||| ||||||| || ||||| Sbjct 910684 ATACCTTCTTTATCCTGAATTTTTGCCTTTACATTCTCAATTGTATCTGAGGGTTCCACT 910743 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || |||||||| ||||| ||||| ||||| || ||||| Sbjct 910744 TCTAAAGTGATGGTTTTACCAGTTAATGTCTTGACAAAGATCTGCAT 910790 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||||||||||||||| | ||||| || || ||| || ||||||||||||||||| Sbjct 909879 ACCTCCTCTCAATCTAAGTACCAAGTGAAGAGTGGATTCCTTTTGAATATTATAATCAGA 909938 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| || |||| || | |||||| || ||||| || | ||||| ||||| |||| Sbjct 909939 TAAGGTGCGTCCATCTTCTAGTTGTTTGCCGGCAAAGATAAGACGTTGTTGGTCTGGAGG 909998 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| ||||| ||||| || || | | | || || | || || || Sbjct 909999 GATACCTTCCTTATCCTGTATTTTAGCCTTAACATTTTCGATTGTGTCAGATGGTTCAAC 910058 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || ||||| || || || || || || ||||| || ||||| Sbjct 910059 TTCCAAAGTTATTGTCTTTCCTGTCAATGTTTTAACAAAAATCTGCAT 910106 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GT 43952 ||||||||||||||||| |||| ||| || ||| ||||||||||| || || || | Sbjct 910107 ACCTCCTCTCAATCTTAGTACCAGATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGA 910166 Query 43953 TTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 | | || |||| || | |||||| || ||||| || || ||||| || || | | Sbjct 910167 GAGAGTTCTGC-CATCCTCTAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGGG 910225 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | |||||||||||| |||||| || || | | | || || | || || | Sbjct 910226 GAATACCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCGATTGTGTCAGATGGTTCAA 910285 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 | || | || || || || || || ||||| || |||||||||||||| Sbjct 910286 CTTCCAAAGTTATCGTCTTTCCTGTCAAAGTTTTGACAAATATTTGCAT 910334 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 43931 TCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAAT 43990 || |||||||| ||||| || | ||| | || || |||||||| || || || Sbjct 907863 TCCTTTTGAATGTTATAGTCAGACAGAGTACGTCCGTCTTCTAATTGTTTGCCAGCGAAG 907922 Query 43991 ATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATA 44050 |||| ||||| || || | || | ||||||||||||| ||||||| || || | Sbjct 907923 ATCAGACGTTGTTGATCTGGGGGGATACCTTCTTTATCTTGAATTTTTGCCTTTACATTT 907982 Query 44051 GCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACA 44110 | | || || | ||| || || || | ||||||||||| || || || || || || Sbjct 907983 TCGATTGTGTCAGACGGTTCAACTTCCAAGGTAATTGTTTTTCCTGTCAATGTTTTGACG 908042 Query 44111 AATATTTGCAT 44121 ||||||||||| Sbjct 908043 AATATTTGCAT 908053 >seq66 Length=580730 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||| | ||| | | ||||| || | ||| ||||||||||||||||||||| | Sbjct 317518 CCTCCACGCAAACGAAGAACCAAGTGCAATGTGGATTCTTTTTGAATATTATAATCGGAT 317577 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 || ||| |||| || | |||||| || || || || | ||||||||||| | || Sbjct 317578 AAGGTACGACCATCCTCGAGTTGTTTGCCGGCGAAAATAAGACGTTGCTGGTCTGGGGGG 317637 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | |||||| || ||| ||| || || || | ||| || |||| || || || Sbjct 317638 ATACCTTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCTGAAGGTTCGACT 317697 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || |||||||| ||||||||||| || || || || ||||| Sbjct 317698 TCCAGAGTGATTGTTTTCCCGGTTAAAGTTTTGACGAAAATCTGCAT 317744 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/228 (68%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||||||||| | ||||||||||| || ||||| |||||||| || || Sbjct 320029 CCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAA 320088 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | |||| || | |||||| || || || || | |||||||| || | || Sbjct 320089 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGA 320148 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | |||||| || || || || || | ||| ||| || |||| || || || Sbjct 320149 ATACCTTCCTTGTCCTGGATCTTAGCCTTTA-CATTTCAATGGTGTCTGAAGGTTCGACT 320207 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || | || || ||||| ||||||||||| || ||||| || |||||| Sbjct 320208 TCCAGGGTGATGGTTTTCCCGGTTAAAGTTTTTACAAAAATCTGCATG 320255 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATC-GTT 43953 |||||||||||||| | ||||||||||| || ||||| |||||||| || || | Sbjct 320256 CCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAA 320315 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 | || | |||| || | |||||| || || || || | |||||||| || | || Sbjct 320316 GAGTT--CTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGG 320373 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | ||||| || || || || || || | ||| || || | || || || Sbjct 320374 AATGCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGAC 320433 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || | || |||||||| ||||||||||| || ||||| || |||||| Sbjct 320434 TTCCAGAGTGATTGTTTTTCCGGTTAAAGTTTTTACAAAAATCTGCATG 320482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354764356041324