Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 seq66 104 2e-17 >seq5 Length=1768869 Score = 109 bits (120), Expect = 5e-19 Identities = 186/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||||||||| | |||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct 910562 TTCCTCCTCGAAGTCTCAGTACCAAATGCAGTGTAGATTCCTTTTGGATGTTATAATCAG 910621 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || || ||||| | ||||||||| ||| | || || | |||||||| || Sbjct 910622 ACAAGGTGCGTCCGTCTTCTAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGGG 910681 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||| || ||||||| || || | ||| | ||| |||||| Sbjct 910682 GAATACCTTCTTTATCCTGAATTTTTGCCTTTACATTCTCAATTGTATCTGAGGGTTCCA 910741 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAACTCT 20219 ||| | || |||||||| || || || || |||||||| || |||||| | || | Sbjct 910742 CTTCTAAAGTGATGGTTTTACCAGTTAATGTCTTGACAAAGATCTGCATTCTGTAA-TAA 910800 Query 20220 TATAAATGACAAAAGTACTGGTTAAAA 20246 || ||| |||||| || ||| |||| Sbjct 910801 TA-AAACGACAAATGTTTAGGTAAAAA 910826 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 19981 TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCC 20040 |||||| ||||| | || |||||||| | || |||||||||||||| ||||| || Sbjct 907598 TCCTCCACGTAAGCGTAAAACCAAATGCAACGTGGATTCTTTTTGTATATTGTAGTCTGA 907657 Query 20041 CATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGG 20100 | ||| |||||||||||||||||| ||| |||| | | ||||| || || Sbjct 907658 AAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGGTCTGGTGG 907717 Query 20101 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGT 20160 | |||||||| || ||||| ||| || | ||| | ||| |||||| Sbjct 907718 AATACCTTCTTTATCTTGGATTTTCGCTTTTACGTTTTCAATGGTATCAGAGGGTTCCAC 907777 Query 20161 TTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || || || || || | ||||| ||||||||||||||| Sbjct 907778 TTCCAAAGTGATCGTCTTTCCTGTGAGGGTTTTCACAAAAATTTGCATT 907826 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 ||||| || || || ||||| ||||| |||||||| || || || | ||||||| Sbjct 909670 ACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTGCCATCTTCC 909729 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 ||||||||||| ||| | ||||| | |||||||| || | |||||||| || | Sbjct 909730 AATTGTTTGCCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGA 909789 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 ||||| || || | ||| | || ||||| ||||| || || ||||| Sbjct 909790 ATTTTAGCCTTGACATTTTCAATTGTGTCAGATGGTTCGACTTCCAAAGTTATTGTTTTT 909849 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||||| |||||||| ||||| ||||| Sbjct 909850 CCTGTCAATGTTTTGACGAAAATCTGCAT 909878 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| || || | |||| ||| || || ||||||||||| |||||||| || Sbjct 910108 CCTCCTCTCAATCTTAGTACCAGATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAG 910167 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| | ||| || | ||||||||| ||| | || | | |||||||| ||| Sbjct 910168 AGAGTTCTGCCATCCTCTAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGGGGA 910227 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || |||||| ||||| | | | | || ||||| | Sbjct 910228 ATACCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCGATTGTGTCAGATGGTTCAACT 910287 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || || || || || ||||| ||||||||||| |||||||| Sbjct 910288 TCCAAAGTTATCGTCTTTCCTGTCAAAGTTTTGACAAATATTTGCAT 910334 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 20000 ACCAAATGTA-GTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||||| || | | || ||||| ||||| || ||||| || || || | |||||| Sbjct 909441 ACCAAGTGAAAGGGTGGATTCCTTTTGGATATTGTAGTCCGACAGGGTCCTGCCATCTTC 909500 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 |||||||||||| ||| | ||||| | ||||| || ||| | ||||||||||| Sbjct 909501 CAATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG 909560 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 |||||| || || | ||| | || ||||| ||||| || || || || Sbjct 909561 AATTTTAGCCTTGACATTCTCAATTGTGTCAGATGGTTCAACTTCCAAAGTTATCGTCTT 909620 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || ||||| |||||||| ||||||||||| Sbjct 909621 TCCTGTCAATGTTTTGACGAAAATTTGCAT 909650 >seq66 Length=580730 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| | ||||| | || ||||| ||||||||||| || || |||||||| || Sbjct 317972 TTCCTCCCCTCAACCTGAGTACTAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 318031 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| | |||||| | |||||| || || |||| || | ||| ||||| || Sbjct 318032 AAAGAGTTCTTCCATCTTCAAGTTGTTTACCGGCGAAAATGAGACGCTGCTGATCTGGGG 318091 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| ||||| || || | ||| | || |||||| Sbjct 318092 GAATACCTTCTTTGTCCTGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGA 318151 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||||| ||||| ||||| || ||||| || ||||| |||||| Sbjct 318152 CTTCCAGAGTAATTGTTTTTCCGGTTAAAGTTTTTACGAAAATCTGCATT 318201 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| | ||||| | |||||||| ||||||||||| || || |||||||| || Sbjct 317744 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 317803 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| | ||| || | |||||| || || |||| || | || ||||| || Sbjct 317804 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGG 317863 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| ||||| || || | ||| | || |||||| Sbjct 317864 GAATACCTTCTTTGTCCTGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGA 317923 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || ||||| ||||| || ||||| || ||||| |||||| Sbjct 317924 CTTCCAGAGTGATTGTTTTCCCGGTTAAAGTTTTTACGAAAATCTGCATT 317973 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/230 (69%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| | ||||| | |||||||| ||||||||||| || || |||||||| || Sbjct 318660 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 318719 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| | ||| || | |||||| || || |||| || | || ||||| || Sbjct 318720 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATC-TGGG 318778 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| || || || || | ||| | || |||||| Sbjct 318779 GAATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCAA 318838 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||||| ||||| || || || ||||| || ||||| |||||| Sbjct 318839 CTTCCAGAGTAATTGTTTTTCCAGTTAAAGTTTTTACGAAAATCTGCATT 318888 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| | ||||| | |||||||| ||||||||||| || || |||||||| || Sbjct 319116 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 319175 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| | ||| || | |||||| || || |||| || | || ||||| | Sbjct 319176 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGCG 319235 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| || || || || | ||| | || |||||| Sbjct 319236 GAATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGA 319295 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||||| ||||| || || || ||||| || ||||| |||||| Sbjct 319296 CTTCCAGAGTAATTGTTTTTCCAGTTAAAGTTTTTACGAAAATCTGCATT 319345 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| | ||||| | |||||||| ||||||||||| || || |||||||| || Sbjct 319572 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 319631 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| | ||| || | |||||| || || |||| || | || ||||| || Sbjct 319632 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGG 319691 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| || || || || | ||| | || |||||| Sbjct 319692 GAATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGA 319751 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| ||||| ||||| || || || ||||| || ||||| ||||| Sbjct 319752 CTTCCAGAGTAATTGTTTT-CCAGTTAAAGTTTTTACGAAAATCTGCAT 319799 Score = 86.0 bits (94), Expect = 5e-12 Identities = 156/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||||| || || | ||||||||||||||||||||||| || || ||||| || Sbjct 320256 CCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTC-AGA 320314 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| | ||| || | |||||| || || | || || | || ||||| ||| Sbjct 320315 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGA 320374 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||| ||||| || || || || | ||| | || |||||| | Sbjct 320375 ATGCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACT 320434 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| || || ||||| ||||| || ||||| |||||||| ||||| Sbjct 320435 TCCAGAGTGATTGTTTTTCCGGTTAAAGTTTTTACAAAAATCTGCAT 320481 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 19975 TCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTA 20034 ||| | |||||| || || | | ||||| || | ||| ||||||||||| || || || Sbjct 317511 TCAATATCCTCCACGCAAACGAAGAACCAAGTGCAATGTGGATTCTTTTTGAATATTATA 317570 Query 20035 ATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATC 20094 |||| | || | ||| || | ||||||||| || ||||||| | || || || Sbjct 317571 ATCGGATAAGGTACGACCATCCTCGAGTTGTTTGCCGGCGAAAATAAGACGTTGCTGGTC 317630 Query 20095 GACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGG 20154 ||| | ||||| ||||| ||| || || || | ||| | || ||| Sbjct 317631 TGGGGGGATACCTTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCTGAAGG 317690 Query 20155 TTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||| ||||| || || ||||| ||||| || |||||||| ||||| |||||| Sbjct 317691 TTCGACTTCCAGAGTGATTGTTTTCCCGGTTAAAGTTTTGACGAAAATCTGCATT 317745 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/232 (68%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 ||||||| | ||||| | |||||||| ||||||||||| || || |||||||| || Sbjct 318200 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 318259 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| | ||| || | |||||| || || |||| || | || ||||| || Sbjct 318260 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGG 318319 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||||||||| || || || || | ||| | || |||||| Sbjct 318320 GAATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCAA 318379 Query 20160 TTTCCACGGTAATGG--TTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| ||||| | |||| | ||| || ||||| || ||||| |||||| Sbjct 318380 CTTCCAGAGTAATTGTTTTTTCCAGGTTAAAGTTTTTACGAAAATCTGCATT 318431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419571536678703