Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq66 98.7 8e-16 >seq66 Length=580730 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | |||||| | |||||||||||||| ||||| ||||||||||| |||| Sbjct 317974 CCTCCCCTCAACCTGAGTACTAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAA 318033 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | || || || || |||||| || |||| | |||||||||||| || Sbjct 318034 AGAGTTCTTCCATCTTCAAGTTGTTTACCGGCGAAAATGAGACGCTGCTGATCTGGGGGA 318093 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||| |||||| ||||| ||| | | | ||||| || | || || Sbjct 318094 ATACCTTCTTTGTCCTGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACT 318153 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || ||||| ||||| | |||||| || ||||||||||| Sbjct 318154 TCCAGAGTAATTGTTTTTCCGGTTAAAGTTTTTACGAAAATCTGCAT 318200 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | |||||| | || ||||||||||| ||||| ||||||||||| |||| Sbjct 317746 CCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAA 317805 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | ||||| || || |||||| || |||| | ||| |||||||| || Sbjct 317806 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGA 317865 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||| |||||| ||||| ||| | | | ||||| || | || || Sbjct 317866 ATACCTTCTTTGTCCTGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACT 317925 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || ||||| ||||| | |||||| || ||||||||||| Sbjct 317926 TCCAGAGTGATTGTTTTCCCGGTTAAAGTTTTTACGAAAATCTGCAT 317972 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | |||||| | || ||||||||||| ||||| ||||||||||| |||| Sbjct 319118 CCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAA 319177 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | ||||| || || |||||| || |||| | ||| |||||||| ||| Sbjct 319178 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGCGGA 319237 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||| |||||| || || ||| | | | ||||| || | || || Sbjct 319238 ATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACT 319297 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || ||||| || || | |||||| || ||||||||||| Sbjct 319298 TCCAGAGTAATTGTTTTTCCAGTTAAAGTTTTTACGAAAATCTGCAT 319344 Score = 87.8 bits (96), Expect = 2e-12 Identities = 157/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | ||| || | || ||||||||||| ||||| ||||||||||| |||| Sbjct 318889 CCTCCCCTCAATCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAA 318948 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | ||||| || || |||||| || |||| | ||| |||||||| || Sbjct 318949 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGA 319008 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||| |||||| || || ||| | | | ||||| || | || | || | Sbjct 319009 ATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGGTTCGAC 319068 Query 48680 -TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || ||||| ||||| | |||||| || ||||||||||| Sbjct 319069 TTCCAGAGTAATTGTTTTTCCGGTTAAAGTTTTTACGAAAATCTGCAT 319116 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | ||| || | || ||||||||||| ||||| ||||||||||| |||| Sbjct 319346 CCTCCCCTCAATCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAA 319405 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | ||||| || || |||||| || |||| | ||| |||||||| || Sbjct 319406 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGA 319465 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||| |||||| || || ||| | | | ||||| || | || | || | Sbjct 319466 ATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAG-AGGGTTCGAC 319524 Query 48680 -TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || ||||| ||||| | |||||| || ||||||||||| Sbjct 319525 TTCCAGAGTAATTGTTTTTCCGGTTAAAGTTTTTACGAAAATCTGCAT 319572 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48500 CCTCCGCGCAA-CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558 ||||| | ||| ||| | |||||||||||||| ||||| ||||||||||| |||| Sbjct 318432 CCTCCCCTCAATCCTGAGTACTAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGA 318491 Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACC-GCCGTAAATTAAACGCTGCTGATCCACCG 48617 | || | ||||| || || ||||| | || |||| | ||| |||||||| | Sbjct 318492 AAGAGTTCTTCCATCCTCAAGTTGTTTACCGGGCGAAAATGAGACGTTGCTGATCTGGGG 318551 Query 48618 GCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCG 48677 | | || ||| |||||| || || ||| | | | ||||| || | || || Sbjct 318552 GAATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGA 318611 Query 48678 TCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || ||||| ||||| | |||||| || ||||||||||| Sbjct 318612 CTTCCAGAGTAATTGTTTTTCCGGTTAAAGTTTTTACGAAAATCTGCAT 318660 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | |||||| | || ||||||||||| ||||| ||||||||||| |||| Sbjct 318662 CCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAA 318721 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | ||||| || || |||||| || |||| | ||| ||||||| | || Sbjct 318722 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGAT-CTGGGGA 318780 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||| |||||| || || ||| | | | ||||| || | || || Sbjct 318781 ATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCAACT 318840 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || ||||| || || | |||||| || ||||||||||| Sbjct 318841 TCCAGAGTAATTGTTTTTCCAGTTAAAGTTTTTACGAAAATCTGCAT 318887 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| | |||||| | || ||||||||||| ||||| ||||||||||| |||| Sbjct 319574 CCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAA 319633 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 | || | ||||| || || |||||| || |||| | ||| |||||||| || Sbjct 319634 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGA 319693 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | || ||| |||||| || || ||| | | | ||||| || | || || Sbjct 319694 ATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACT 319753 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || || ||||| || || | |||||| || ||||||||||| Sbjct 319754 TCCAGAGTAATTGTTTT-CCAGTTAAAGTTTTTACGAAAATCTGCAT 319799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421235474561063