Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq42 91.5 8e-14 >seq42 Length=692952 Score = 91.5 bits (100), Expect = 8e-14 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 3911 GTTGAGGGTCAAGAAAATATGCAAGAAATGTTATCGAAAAAGATGTATTTGTGTCAATGT 3970 || || ||| |||| || | || || |||| || || || || || | ||||||||| Sbjct 379780 GTGGATGGTAAAGAGAACTTCCAGGAGGTGTTGTCCAAGAACATTTACATTTGTCAATGT 379839 Query 3971 TTAATTGCATTGATGATCATACGAATTGGTGGTCATTGTGTTATCAAATTTTTCGATATA 4030 || |||||||| ||| || ||| | || || | ||||| |||||| ||||| || Sbjct 379840 TTGGTTGCATTGGAGATATTAAGAAATCACGGCCACTTTGTTACCAAATTATTCGACGTA 379899 Query 4031 TTTACACCTTTTAGTGCTGGTTTAGTGTATTTGATGTA 4068 ||||| || ||||| | |||||| ||||||| ||||| Sbjct 379900 TTTACTCCGTTTAGCGTCGGTTTATTGTATTTAATGTA 379937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276543276167689