Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq570 132 3e-26 seq84 123 1e-23 seq492 122 5e-23 seq37 122 5e-23 seq27 122 5e-23 seq51 120 2e-22 seq1544 118 6e-22 seq383 118 6e-22 seq137 118 6e-22 seq7 118 6e-22 seq6 116 2e-21 >seq570 Length=101851 Score = 132 bits (146), Expect = 3e-26 Identities = 92/105 (88%), Gaps = 5/105 (5%) Strand=Plus/Minus Query 11430 AATATAGAATTAAT-----AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACC 11484 ||||| ||||||| ||||||| |||||||||||||| |||||||||| ||||| Sbjct 49268 AATATCAAATTAATTCATTAAAAAATAAAATTGGCCCATGAGGGGATCGAACCCGCGACC 49209 Query 11485 TTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 49208 TTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 49164 Score = 123 bits (136), Expect = 1e-23 Identities = 90/102 (88%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 11429 AAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCG 11488 ||| ||| |||| |||||||| |||||||||||| |||||||||| ||||||||| Sbjct 47945 AAAAATA-AATT--TAAAAAAT---ATTGGCCCATGAGGGGATCGAACCCGCGACCTTCG 47998 Query 11489 CGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||||| ||||||||||||||||||||| Sbjct 47999 CGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 48040 Score = 123 bits (136), Expect = 1e-23 Identities = 85/95 (89%), Gaps = 4/95 (4%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||||| |||||| || |||||||||| |||||||||| ||||||||||||||||| Sbjct 48923 AATTAA--AAAAATTAA--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 48978 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCGT 11531 |||||||||||| |||||||||||||||||||||| Sbjct 48979 GCACGACGCTCTAACCAACTGAGCTAATGGGCCGT 49013 Score = 123 bits (136), Expect = 1e-23 Identities = 84/94 (89%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||||| |||||| || |||||||||| |||||||||| ||||||||||||||||| Sbjct 53518 AATTAAAAAAAAAGTAA--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 53461 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||| ||||||||||||||||||||| Sbjct 53460 GCACGACGCTCTAACCAACTGAGCTAATGGGCCG 53427 Score = 120 bits (132), Expect = 2e-22 Identities = 88/101 (87%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 11432 TATAGAATTAA--TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489 |||| || ||| ||||||| || |||||||||| |||||||||| |||||||||| Sbjct 52591 TATAAAAATAAATTAAAAAAGTAA--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGC 52534 Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||||||||||||||||||| ||||||||||||||||||||| Sbjct 52533 GTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 52493 Score = 116 bits (128), Expect = 2e-21 Identities = 86/100 (86%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 11431 ATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490 ||| | ||| ||| ||||| | | ||||||||| |||||||||| ||||||||||| Sbjct 54504 ATAAAAAATAAATGAAAAAAGTACT-GGCCCATGAGGGGATCGAACCCGCGACCTTCGCG 54446 Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||||||||||||| ||||||||||||||||||||| Sbjct 54445 TTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCG 54406 >seq84 Length=530715 Score = 123 bits (136), Expect = 1e-23 Identities = 81/89 (91%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||| | ||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct 237530 AATAAAAATT--AATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 237473 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 237472 GACGCTCTAACCAACTGAGCTAATGGGCC 237444 >seq492 Length=120985 Score = 122 bits (134), Expect = 5e-23 Identities = 84/96 (88%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 || ||||| ||| || ||||||||||| |||||||||| ||||||||||||||||| Sbjct 83426 AAATAATAGTAAAAAAACTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 83485 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCCGTC 11532 |||||||||||| |||||||||||||||||||| || Sbjct 83486 GCACGACGCTCTAACCAACTGAGCTAATGGGCCATC 83521 >seq37 Length=719425 Score = 122 bits (134), Expect = 5e-23 Identities = 79/86 (92%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| || ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 82877 AAAAAATGAA-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 82819 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 82818 GCTCTAACCAACTGAGCTAATGGGCC 82793 >seq27 Length=904446 Score = 122 bits (134), Expect = 5e-23 Identities = 90/102 (88%), Gaps = 4/102 (4%) Strand=Plus/Minus Query 11429 AAATATAGAATTAATAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTC 11487 ||||||| |||||| || ||| || | |||||||||| |||||||||| |||||||| Sbjct 595162 AAATATA-AATTAAAAACAAA--AAGTGTGGCCCATGAGGGGATCGAACCCGCGACCTTC 595106 Query 11488 GCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||| |||||||||||||||||||| Sbjct 595105 GCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 595064 Score = 118 bits (130), Expect = 6e-22 Identities = 82/93 (88%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||| |||||||| | |||||||||| |||||||||| ||||||||||||||||| Sbjct 609886 AATTTATAAAAAAGTA---TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 609942 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 609943 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 609975 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 618959 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 618900 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 618899 TGAGCTAATGGGCC 618886 >seq51 Length=640015 Score = 120 bits (132), Expect = 2e-22 Identities = 91/105 (87%), Gaps = 6/105 (6%) Strand=Plus/Minus Query 11429 AAATATAGAATTAA---TAAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACC 11484 |||||| |||| || ||||||| || | |||||||||| |||||||||| ||||| Sbjct 434811 AAATATTGAATAAAATTTAAAAAA--AAGTATGGCCCATGAGGGGATCGAACCCGCGACC 434754 Query 11485 TTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 434753 TTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 434709 Score = 120 bits (132), Expect = 2e-22 Identities = 77/85 (91%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 436427 AAAAAGGTAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 436486 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 436487 CTCTAACCAACTGAGCTAATGGGCC 436511 >seq1544 Length=16245 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 12913 AAAAAAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 12856 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 12855 GCTCTAACCAACTGAGCTAATGGGCC 12830 >seq383 Length=152166 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 10601 AAAAAAT--ATTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 10544 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 10543 GCTCTAACCAACTGAGCTAATGGGCC 10518 >seq137 Length=397722 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| || ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 385167 AAAAAAACAG-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 385225 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 385226 GCTCTAACCAACTGAGCTAATGGGCC 385251 >seq7 Length=1681418 Score = 118 bits (130), Expect = 6e-22 Identities = 78/86 (91%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| || ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 1679720 AAAAAAACAG-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 1679662 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 1679661 GCTCTAACCAACTGAGCTAATGGGCC 1679636 >seq6 Length=1714539 Score = 116 bits (128), Expect = 2e-21 Identities = 83/95 (87%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAA--AATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTAT 11494 ||||| ||| | || || ||||||||||| |||||||||| ||||||||||||||| Sbjct 1631618 AATTATTAAGATTAAAAAAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTAT 1631677 Query 11495 TAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||| |||||||||||||||||||| Sbjct 1631678 TAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 1631712 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261481438451788