Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq308 170 5e-37 seq97 170 5e-37 seq44 145 2e-29 >seq308 Length=193707 Score = 170 bits (188), Expect = 5e-37 Identities = 834/1320 (63%), Gaps = 14/1320 (1%) Strand=Plus/Minus Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGG 363827 |||| ||||||||| | || || |||| || || || ||||||||||| || || | Sbjct 6627 TGGTGCCCATGCTTAGAGTTTTCAACAACACCGCCAGATACGTCGACCAAGGAGGCAACA 6568 Query 363828 AAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTT 363887 |||| | || || ||||| || ||| | || || || || ||||| ||| |||| Sbjct 6567 AAAGACCT--GGAGCTTTTGCCATCTATTTGGAACCATGGCACGCAGATATCTTTCAGTT 6510 Query 363888 TCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGC 363947 | | || || || |||||||| ||||| || | || || | || |||||||||| Sbjct 6509 TTTGGATCTGAAAAAGAACACGGGTAAAGAAGAGTACCGCGCTAGAGACTTGTTCTATGC 6450 Query 363948 ACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTT 364007 | ||| | | || |||||||| ||||| || | | |||||| | | Sbjct 6449 CTTGTGGATCCCGGATTTGTTTATGAAACGCGTTGAAACCAACGGCACTTGGTCCTTGAT 6390 Query 364008 TTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATA 364067 ||||| || | | || |||||| ||||| ||||| || | | | | | || Sbjct 6389 GTGCCCGCATCAGTCCCCCGGTCTTGCCGATTGCTGGGGCGAGAAGTTCGAGGAATTGTA 6330 Query 364068 CGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCC-GCACAGAAGCTATGGT 364126 | || || ||| || || || |||| |||| | || || || || || ||| Sbjct 6329 CATGAAATACGAAGAAGAAGGTAAAT-TCGTCGAACAAGTGCCAGCGCAAAAACTGTGGC 6271 Query 364127 TTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGT 364186 |||||| || | || ||| | || || || ||||| || |||||||||||||| | | Sbjct 6270 GTGCCATTATTGCGTCACAGGTCGAAACTGGCACACCTTACATGTTGTACAAAGACGCCT 6211 Query 364187 GCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACC 364245 | ||| | || |||||| || || | || || || ||| || || ||| | || || Sbjct 6210 GTAACAGAAAAAGCAACCAACAAAACTTAGGCACGAT-CAGAAGTAGTAACTTGTGCACG 6152 Query 364246 GAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCG 364305 ||||| |||||||| || |||| || || ||| || ||||| | ||||| || || Sbjct 6151 GAGATCATTGAATATACGTCTCCTGATGAAGTTGCTGTTTGTAATTTGGCGTCCATTGCC 6092 Query 364306 CTTCCGGCGTTTGTAAAAGATGGT------ACTTTTGACCACCAGCATCTTTATGACGTA 364359 | |||||| ||| || | || | ||| | | | | | || | Sbjct 6091 GTGAACATGTTTGTTAAACCTGATCGCAAAACGTATGATTTCGAACGATTGAAAGAAATT 6032 Query 364360 ACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCT 364419 | | || | | ||| | |||| |||| || ||||||||||| ||||| Sbjct 6031 GCTAAAGTTGTAGCCAGAAATTTAGACACCATTATAGATGTAAATTATTATCCTATTCCC 5972 Query 364420 GAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCT 364479 ||||| || || || |||||||| | || |||||| |||| ||||| || | ||| Sbjct 5971 GAAGCAAAGAACTCAAACATGCGTCACAGACCAATTGGTATTGGCGTACAAGGTTTAGCT 5912 Query 364480 GACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAG 364539 || | || || | | ||| | ||||| || || | | | || | Sbjct 5911 GATGCCTTCATTTTAATGCGTATGCCTTTTGACAGCGAAGAAGCGAGACTGTTGAACATC 5852 Query 364540 GAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACC 364599 |||| || |||||||| |||| |||||| || || ||||| || ||| ||| Sbjct 5851 CAGATTTTCGAAACAATTTATTATGCCGCTTTGGAAGCCAGCTGTGAATTAGCAGAAAAG 5792 Query 364600 AAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGAT 364659 ||||| | ||| || || || || |||| | | || | || || | ||| Sbjct 5791 AAGGGCACATACAGCACGTACGAAGGCAGCCCTGTAAGTAAAGGTATTTTACAATACGAT 5732 Query 364660 CTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAG 364719 | ||||| ||||| ||| | | | ||| |||||| | | | || | Sbjct 5731 ATGTGGAACGTCACACCAACAGATCTGTGGGACTGGGCCGCCTTGAAGGCTAAAATCGCA 5672 Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 || |||||| || || || | | || || |||||||| || ||| || || Sbjct 5671 AAACATGGTGTGCGAAATTCGTTGTTGTTGGCACCGATGCCCACAGCCAGTACCGCTCAA 5612 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 || | || || || |||| | | ||||| | ||| |||| |||| | | | ||| Sbjct 5611 ATTTTAGGCAATAATGAGTCCGTTGAACCTTACACATCCAATATTTACACCAGAAGAGTT 5552 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 | || |||||||| | ||||| ||| | | || |||| ||||| | || ||| Sbjct 5551 TTGTCTGGAGAATTCCAAGTAGTGAATCAACATTTACTCAAAGATCTGACTGAATTGGGG 5492 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 ||||| || ||||||||| | |||||||| ||| || | || |||||| Sbjct 5491 TTGTGGAACGATGTTATGAAGAACCAGATCATCGCAAACTGTGGATCAATCCAAAACATT 5432 Query 364960 CCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGA 365019 || ||| | || || || | ||| | ||||||||||| || ||||| ||||| | | Sbjct 5431 CCTGGAATACCCGATAATATTAAGGCAATTTACAAAACTGTTTGGGAGATTTCACAGAAA 5372 Query 365020 ACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079 || | | |||||||| ||||| ||||| || ||| ||| || ||||| || ||| Sbjct 5371 GTAGTCTTGAACATGGCGGCGGATCGTGGTGCCTTCATCGATCAAAGTCAGTCTTTGAAC 5312 >seq97 Length=492714 Score = 170 bits (188), Expect = 5e-37 Identities = 834/1320 (63%), Gaps = 14/1320 (1%) Strand=Plus/Plus Query 363770 TGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGG 363827 |||| ||||||||| | || || |||| || || || ||||||||||| || || | Sbjct 9763 TGGTGCCCATGCTTAGAGTTTTCAACAACACCGCCAGATACGTCGACCAAGGAGGCAACA 9822 Query 363828 AAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTT 363887 |||| | || || ||||| || ||| | || || || || ||||| ||| |||| Sbjct 9823 AAAGACCT--GGAGCTTTTGCCATCTATTTGGAACCATGGCACGCAGATATCTTTCAGTT 9880 Query 363888 TCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGC 363947 | | || || || |||||||| ||||| || | || || | || |||||||||| Sbjct 9881 TTTGGATCTGAAAAAGAACACGGGTAAAGAAGAGTACCGCGCTAGAGACTTGTTCTATGC 9940 Query 363948 ACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTT 364007 | ||| | | || |||||||| ||||| || | | |||||| | | Sbjct 9941 CTTGTGGATCCCGGATTTGTTTATGAAACGCGTTGAAACCAACGGCACTTGGTCCTTGAT 10000 Query 364008 TTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATA 364067 ||||| || | | || |||||| ||||| ||||| || | | | | | || Sbjct 10001 GTGCCCGCATCAGTCCCCCGGTCTTGCCGATTGCTGGGGCGAGAAGTTCGAGGAATTGTA 10060 Query 364068 CGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCC-GCACAGAAGCTATGGT 364126 | || || ||| || || || |||| |||| | || || || || || ||| Sbjct 10061 CATGAAATACGAAGAAGAAGGTAAAT-TCGTCGAACAAGTGCCAGCGCAAAAACTGTGGC 10119 Query 364127 TTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGT 364186 |||||| || | || ||| | || || || ||||| || |||||||||||||| | | Sbjct 10120 GTGCCATTATTGCGTCACAGGTCGAAACTGGCACACCTTACATGTTGTACAAAGACGCCT 10179 Query 364187 GCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACC 364245 | ||| | || |||||| || || | || || || ||| || || ||| | || || Sbjct 10180 GTAACAGAAAAAGCAACCAACAAAACTTAGGCACGAT-CAGAAGTAGTAACTTGTGCACG 10238 Query 364246 GAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCG 364305 ||||| |||||||| || |||| || || ||| || ||||| | ||||| || || Sbjct 10239 GAGATCATTGAATATACGTCTCCTGATGAAGTTGCTGTTTGTAATTTGGCGTCCATTGCC 10298 Query 364306 CTTCCGGCGTTTGTAAAAGATGGT------ACTTTTGACCACCAGCATCTTTATGACGTA 364359 | |||||| ||| || | || | ||| | | | | | || | Sbjct 10299 GTGAACATGTTTGTTAAACCTGATCGCAAAACGTATGATTTCGAACGATTGAAAGAAATT 10358 Query 364360 ACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCT 364419 | | || | | ||| | |||| |||| || ||||||||||| ||||| Sbjct 10359 GCTAAAGTTGTAGCCAGAAATTTAGACACCATTATAGATGTAAATTATTATCCTATTCCC 10418 Query 364420 GAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCT 364479 ||||| || || || |||||||| | || |||||| |||| ||||| || | ||| Sbjct 10419 GAAGCAAAGAACTCAAACATGCGTCACAGACCAATTGGTATTGGCGTACAAGGTTTAGCT 10478 Query 364480 GACGTTTTTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAG 364539 || | || || | | ||| | ||||| || || | | | || | Sbjct 10479 GATGCCTTCATTTTAATGCGTATGCCTTTTGACAGCGAAGAAGCGAGACTGTTGAACATC 10538 Query 364540 GAGATCTTTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACC 364599 |||| || |||||||| |||| |||||| || || ||||| || ||| ||| Sbjct 10539 CAGATTTTCGAAACAATTTATTATGCCGCTTTGGAAGCCAGCTGTGAATTAGCAGAAAAG 10598 Query 364600 AAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGAT 364659 ||||| | ||| || || || || |||| | | || | || || | ||| Sbjct 10599 AAGGGCACATACAGCACGTACGAAGGCAGCCCTGTAAGTAAAGGTATTTTACAATACGAT 10658 Query 364660 CTATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAG 364719 | ||||| ||||| ||| | | | ||| |||||| | | | || | Sbjct 10659 ATGTGGAACGTCACACCAACAGATCTGTGGGACTGGGCCGCCTTGAAGGCTAAAATCGCA 10718 Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 || |||||| || || || | | || || |||||||| || ||| || || Sbjct 10719 AAACATGGTGTGCGAAATTCGTTGTTGTTGGCACCGATGCCCACAGCCAGTACCGCTCAA 10778 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 || | || || || |||| | | ||||| | ||| |||| |||| | | | ||| Sbjct 10779 ATTTTAGGCAATAATGAGTCCGTTGAACCTTACACATCCAATATTTACACCAGAAGAGTT 10838 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 | || |||||||| | ||||| ||| | | || |||| ||||| | || ||| Sbjct 10839 TTGTCTGGAGAATTCCAAGTAGTGAATCAACATTTACTCAAAGATCTGACTGAATTGGGG 10898 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 ||||| || ||||||||| | |||||||| ||| || | || |||||| Sbjct 10899 TTGTGGAACGATGTTATGAAGAACCAGATCATCGCAAACTGTGGATCAATCCAAAACATT 10958 Query 364960 CCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGA 365019 || ||| | || || || | ||| | ||||||||||| || ||||| ||||| | | Sbjct 10959 CCTGGAATACCCGATAATATTAAGGCAATTTACAAAACTGTTTGGGAGATTTCACAGAAA 11018 Query 365020 ACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAAC 365079 || | | |||||||| ||||| ||||| || ||| ||| || ||||| || ||| Sbjct 11019 GTAGTCTTGAACATGGCGGCGGATCGTGGTGCCTTCATCGATCAAAGTCAGTCTTTGAAC 11078 >seq44 Length=686090 Score = 145 bits (160), Expect = 2e-29 Identities = 357/529 (67%), Gaps = 18/529 (3%) Strand=Plus/Minus Query 22433 TTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACA--ATGAACGTTCA--TTCGCG 22488 |||| || ||||| || ||||| |||| ||||| | || | ||| | || || | Sbjct 254999 TTAAAAAGAAGGCTGAATGGGCATTGAACTGGATCAGCAGCAAGAATGC-CAGTTTTGGT 254941 Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA-TTTTGT-G 22546 || | || | || ||||||| ||||| ||||||||||||||||| || ||||| | Sbjct 254940 GAGAGAATTGTAGCTTTTGCTGCTGTTGAGGGCATTTTCTTTTCTGG--CAGTTTTGCAG 254883 Query 22547 CAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAA 22606 |||| || ||||| ||||| | | ||||||| || |||| |||||||||||||||| Sbjct 254882 CAATTTTCTGGCTCAAAAAGAGGGGTCTTATGCCTGGCTTAACCTTTTCAAATGAGTTAA 254823 Query 22607 TTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATA--T 22664 || | ||||| ||||| || |||||||| ||| | | | || || || | Sbjct 254822 TTTCAAGGGATGAAGGTCTACACTGTGATTTTGCTTGTTTAATGT-TC----TCCTACCT 254768 Query 22665 CATTCATAAACTTCCATATGAAACTGT-ACTTGATATTATTACAAATGCAGTTGAACTTG 22723 | || |||| | || | |||| || || | ||| ||| |||| || ||| Sbjct 254767 TGTACAAAAACCTTCAAAGGAAAGAGTGACAAG-TATAATTCGCGATGCTGTAATCATTG 254709 Query 22724 AACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAA 22783 ||| ||| | || || |||||||| ||| | ||||| || ||| ||| || Sbjct 254708 AACAAGAATTCCTCACTGATGCTTTACCAGTGAGTTTAATTGGCATGAATTGTAAATTAA 254649 Query 22784 TGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGC 22843 || || ||||||| | ||||| || ||| | |||| | | | || | || ||| Sbjct 254648 TGTGTCAATATATTGAGTTTGTGGCTGATAGATTATTGACAGAATTGGGGTGTGAGAAGA 254589 Query 22844 ATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCA 22903 |||||| || || ||||| ||||| | ||| | | || || || ||||| || | Sbjct 254588 TTTATAATGTTGTAAATCCTTTTGATTTCATGACAATAATCTCTACAGATGGAAAAACAA 254529 Query 22904 ATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGA 22952 | ||||| ||||| | |||||| ||||| ||||||| || || || || Sbjct 254528 ACTTCTTTGAAAAGAAAGTTGGAGAATATCAAAAAGTTGGAGTGATTGA 254480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303302450295266