Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq5 111 1e-19 seq66 91.5 1e-13 >seq5 Length=1768869 Score = 111 bits (122), Expect = 1e-19 Identities = 186/265 (70%), Gaps = 3/265 (1%) Strand=Plus/Minus Query 111149 TTTTAACTAATACCTTGGTCATTTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGA 111208 ||||| |||| || || ||| ||| || | || | |||||| || |||||||| || Sbjct 910825 TTTTACCTAA-ACATTTGTCGTTT-TATTA-TTACAGAATGCAGATCTTTGTCAAGACAT 910769 Query 111209 TGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAAC 111268 | || || |||||||| || | ||| ||||||| ||| | ||| | ||||| Sbjct 910768 TAACTGGTAAAACCATCACTTTAGAAGTGGAACCCTCAGATACAATTGAGAATGTAAAGG 910709 Query 111269 AAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCA 111328 ||||||| || |||||||| ||||| ||||||||| | || || | ||| |||| Sbjct 910708 CAAAAATTCAGGATAAAGAAGGTATTCCCCCAGATCAACAACGTCTGATCTTTGCTGGCA 910649 Query 111329 AACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTAC 111388 ||||| | ||||| || || | |||||||| || ||||| ||||||||||| | Sbjct 910648 AACAACTAGAAGACGGACGCACCTTGTCTGATTATAACATCCAAAAGGAATCTACACTGC 910589 Query 111389 ATTTAGTGTTGCGTCTGCGCGGTGG 111413 |||| || || | || || || || Sbjct 910588 ATTTGGTACTGAGACTTCGAGGAGG 910564 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||||||| ||||| | || || || || || || ||||| ||||||| Sbjct 907826 AATGCAAATTTTTGTGAAAACCCTCACAGGAAAGACGATCACTTTGGAAGTGGAACCCTC 907767 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 ||| | ||| | |||||| ||||| || |||||||| |||| || || Sbjct 907766 TGATACCATTGAAAACGTAAAAGCGAAAATCCAAGATAAAGAAGGTATTCCACCAGACCA 907707 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||| | | |||| ||| |||||||||||||||||| ||| | | || || || Sbjct 907706 ACAACGTTTGATTTTTGCTGGCAAACAATTGGAAGATGGACGTACTCTTTCAGACTACAA 907647 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCG 111401 ||||||||||||||| || | ||||| || || || Sbjct 907646 TATACAAAAAGAATCCACGTTGCATTTGGTTTTACG 907611 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| |||||||| |||| || || || || || ||||| ||||| Sbjct 908965 ATGCAAATTTTCGTCAAAACATTGACAGGAAAGACGATAACTTTGGAAGTTGAACCATCT 908906 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | | | | || || |||||| ||||||||||| ||||| || ||| Sbjct 908905 GACACAATCGAGAATGTTAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 908846 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | ||||| | ||| |||||||||||||||||| | || || | || || ||| Sbjct 908845 CAACGTCTTATCTTTGCTGGCAAACAATTGGAAGATGGCAGGACCCTGTCAGACTACAAT 908786 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| || || || || || | || ||| | || || Sbjct 908785 ATCCAAAAGGAATCCACCCTTCACTTGGTTCTTCGACTGAGAGGGGG 908739 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||||||||| |||||||| |||| || || || || || ||||| ||||| Sbjct 909650 ATGCAAATTTTCGTCAAAACATTGACAGGAAAGACGATAACTTTGGAAGTTGAACCATCT 909591 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || |||||| ||||||||||| ||||| || ||| Sbjct 909590 GACACAATTGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCAA 909531 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | ||||| | ||| |||||||||||||||||| | || || | || || ||| Sbjct 909530 CAACGTCTTATCTTTGCTGGCAAACAATTGGAAGATGGCAGGACCCTGTCGGACTACAAT 909471 Query 111367 ATACAAAAAGAATCTACACT 111386 || ||||| ||||| || || Sbjct 909470 ATCCAAAAGGAATCCACCCT 909451 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAA-ACCATTACCGTGGAAACGGAACCCAG 111245 ||||||||||| |||||||| |||| || ||| || || || ||||| ||||| Sbjct 909421 ATGCAAATTTTCGTCAAAACATTGACAGGAAAAGACGATAACTTTGGAAGTTGAACCATC 909362 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | | | | || || |||||| ||||||||||| ||||| || || Sbjct 909361 TGACACAATCGAGAATGTCAAGGCTAAAATTCAAGACAAAGAAGGTATTCCCCCAGACCA 909302 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 |||| | ||||| | ||| |||||||||||||||||| | || || | || || || Sbjct 909301 ACAACGTCTTATCTTTGCTGGCAAACAATTGGAAGATGGCAGGACCCTGTCAGACTACAA 909242 Query 111366 TATACAAAAAGAATCTACACTACATTTAGT 111395 ||| ||||| ||||| || || || || || Sbjct 909241 TATCCAAAAGGAATCCACCCTTCACTTGGT 909212 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 |||||||| || |||||||| |||| || ||||| |||||| ||||| ||||| Sbjct 908053 ATGCAAATATTCGTCAAAACATTGACAGGAAAAACAATTACCTTGGAAGTTGAACCGTCT 907994 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | | | | ||||| ||||||| || |||||||| | ||| |||||| Sbjct 907993 GACACAATCGAAAATGTAAAGGCAAAAATTCAAGATAAAGAAGGTATCCCCCCAGATCAA 907934 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || || | || ||||||||||| ||||| ||| || | || ||||| Sbjct 907933 CAACGTCTGATCTTCGCTGGCAAACAATTAGAAGACGGACGTACTCTGTCTGACTATAAC 907874 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| || | ||| | ||| | || || | ||||| Sbjct 907873 ATTCAAAAGGAATCAACTTTGCATCTTGTGCTTCGCCTAAGAGGTGG 907827 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| ||||| |||||||| |||| || ||||| || || ||||| ||||| Sbjct 909878 ATGCAGATTTTCGTCAAAACATTGACAGGAAAAACAATAACTTTGGAAGTCGAACCATCT 909819 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | || || |||||| || |||||||| |||| |||||| Sbjct 909818 GACACAATTGAAAATGTCAAGGCTAAAATTCAGGATAAAGAAGGAATTCCTCCAGATCAA 909759 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | ||||| | ||| |||||||||||||||||| | || || | || || || Sbjct 909758 CAACGTCTTATCTTTGCTGGCAAACAATTGGAAGATGGCAGGACCCTGTCAGACTACAAC 909699 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 || ||||| ||||| || || || || || | || ||| | || || Sbjct 909698 ATCCAAAAGGAATCCACCCTTCACTTGGTTCTTCGACTGAGAGGAGG 909652 >seq66 Length=580730 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| |||||||| | ||||| ||||| || || ||||| ||||| Sbjct 317745 AATGCAGATTTTCGTCAAAACTTTAACCGGGAAAACAATCACTCTGGAAGTCGAACCTTC 317686 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | ||| | ||||| || ||| ||||| ||||| | ||| || || Sbjct 317685 AGACACCATTGAAAATGTAAAGGCTAAGATTCAAGACAAGGAAGGTATCCCCCCAGACCA 317626 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | ||||||| || ||||||||| | || ||| | || | |||||||||| Sbjct 317625 GCAACGTCTTATTTTCGCCGGCAAACAACTCGAGGATGGTCGTACCTTATCCGATTATAA 317566 Query 111366 TATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413 ||| ||||||||||| ||| | || || || | ||| |||| || || Sbjct 317565 TATTCAAAAAGAATCCACATTGCACTTGGTTCTTCGTTTGCGTGGAGG 317518 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| || ||||| | ||||| ||||| ||||| ||||| ||||| Sbjct 318201 AATGCAGATTTTCGTAAAAACTTTAACCGGAAAAACAATTACTCTGGAAGTCGAACCTTC 318142 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | ||| | ||||| ||||| ||||||||||| ||||| ||||| Sbjct 318141 TGACACCATTGAAAATGTAAAGGCTAAAATCCAGGACAAAGAAGGTATTCCCCCAGATCA 318082 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 || | || |||| || || |||||| | |||||| | |||| | | || || || Sbjct 318081 GCAGCGTCTCATTTTCGCCGGTAAACAACTTGAAGATGGAAGAACTCTTTCTGACTACAA 318022 Query 111366 TATACAAAAAGAATCTACACTACATTTAGT 111395 || || || ||||||||||| |||||||| Sbjct 318021 CATTCAGAAGGAATCTACACTTCATTTAGT 317992 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| || ||||| | ||||| ||||| ||||| ||||| |||||| Sbjct 319573 AATGCAGATTTTCGTAAAAACTTTAACCGGAAAAACAATTACTCTGGAAGTCGAACCCTC 319514 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | ||| | ||||| || || ||||||||||| ||||| ||||| Sbjct 319513 TGACACCATTGAAAATGTAAAGGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCA 319454 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | || |||| || || |||||| | || ||| | |||| | | || || || Sbjct 319453 GCAACGTCTCATTTTCGCCGGTAAACAACTTGAGGATGGAAGAACTCTTTCTGACTACAA 319394 Query 111366 TATACAAAAAGAATCTACACTACATTTAGT 111395 || || || ||||||||||| ||||| || Sbjct 319393 CATTCAGAAGGAATCTACACTTCATTTGGT 319364 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/209 (69%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| |||||||| ||||| | ||||| ||||| || || ||||| ||||| Sbjct 320481 ATGCAGATTTTTGTAAAAACTTTAACCGGAAAAACAATCACTCTGGAAGTCGAACCTTCT 320422 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | ||| | ||||| || || ||||| |||||| ||||| ||||| Sbjct 320421 GACACCATTGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGCATTCCCCCAGATCAG 320362 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || || | || || |||||| | || ||| | |||| | | || || ||| Sbjct 320361 CAACGTCTCATCTTCGCCGGTAAACAACTTGAGGATGGAAGAACTCTT-CTGACTACAAT 320303 Query 111367 ATACAAAAAGAATCTACACTACATTTAGT 111395 || || |||||||||||||||||||| || Sbjct 320302 ATTCAGAAAGAATCTACACTACATTTGGT 320274 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| || ||||| | ||||| ||||| ||||| ||||| |||||| Sbjct 319117 AATGCAGATTTTCGTAAAAACTTTAACCGGAAAAACAATTACTCTGGAAGTCGAACCCTT 319058 Query 111246 C-GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATC 111304 | || | ||| | ||||| || || ||||||||||| ||||| |||| Sbjct 319057 CTGACACCATTGAAAATGTAAAGGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATC 318998 Query 111305 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111364 | ||| | || |||| || || |||||| | || ||| | |||| | | || || | Sbjct 318997 AGCAACGTCTCATTTTCGCCGGTAAACAACTTGAGGATGGAAGAACTCTTTCTGACTACA 318938 Query 111365 ATATACAAAAAGAATCTACACTACATTTAGT 111395 | || || || ||||||||||| ||||| || Sbjct 318937 ACATTCAGAAGGAATCTACACTTCATTTGGT 318907 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || ||||| ||||| |||| ||||||||||| || | ||| ||||| Sbjct 320709 ATGCAGATCTTTGTGAAAACATTGACTGGCAAAACCATCACTCTTGAAGTTGAACCTTCA 320650 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 ||| | ||| | ||||| || || ||||| |||||| |||| |||||| Sbjct 320649 GATACCATTGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGCATTCCTCCAGATCAA 320590 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 ||| | || || | || || |||||| | || ||| | ||| | | || || ||| Sbjct 320589 CAACGTCTCATCTTCGCTGGTAAACAACTTGAGGATGGAAGAACCCTTTCTGACTACAAT 320530 Query 111367 ATACAAAAAGAATCTACACTACATTTAGT 111395 || || |||||||||||||| ||||| || Sbjct 320529 ATTCAGAAAGAATCTACACTTCATTTGGT 320501 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 111186 AATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111245 |||||| ||||| || ||||| | ||||| ||||| || || ||||| ||||| Sbjct 317973 AATGCAGATTTTCGTAAAAACTTTAACCGGGAAAACAATCACTCTGGAAGTCGAACCTTC 317914 Query 111246 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCA 111305 || | ||| | ||||| ||||| ||||||||||| ||||| ||||| Sbjct 317913 TGACACCATTGAAAATGTAAAGGCTAAAATCCAGGACAAAGAAGGTATTCCCCCAGATCA 317854 Query 111306 ACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 111365 ||| | || |||| || || |||||| | || ||| | |||| | | || || || Sbjct 317853 GCAACGTCTCATTTTCGCCGGTAAACAACTTGAGGATGGAAGAACTCTTTCTGACTACAA 317794 Query 111366 TATACAAAAAGAATCTACACTACATTTAGT 111395 || || || ||||||||||| ||||| || Sbjct 317793 CATTCAGAAGGAATCTACACTTCATTTGGT 317764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423024207784600