Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq286 96.9 3e-15 >seq286 Length=205596 Score = 96.9 bits (106), Expect = 3e-15 Identities = 156/222 (70%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 20243 GTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCC 20302 || ||||| |||| ||| ||||| | |||| || || || ||||| ||||| || ||| Sbjct 27022 GTGACATGCGCAATCATGTAAGTAAGCAGGGCGTAACTTGCGATGTTGAAAGGCACGCCC 27081 Query 20303 AAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAA 20362 ||||||||||| | || | ||| |||| | || || | || ||| || || | Sbjct 27082 AAACCCATGTCGGCGGAACGCTGGTACAACATGCACGACAATTCGTCGTTGGCGACGAAG 27141 Query 20363 AATTG-ACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCA 20421 || || || || |||||||||| || | |||||| || |||||| |||||||| Sbjct 27142 AACTGCACGAGAC-AGTGACAGGGGGGCAAAGCCATCTCCGGCAAGTCTATTGGGTTCCA 27200 Query 20422 CGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT 20463 || ||||| || || || | ||| ||| |||||||| || Sbjct 27201 TGCGCACATTATCATCCTGCGATCAGTCGGTTTATTTTTAAT 27242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441355900938920