Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5 152 1e-31 seq109 125 2e-23 seq66 122 2e-22 seq153 102 2e-16 >seq5 Length=1768869 Score = 152 bits (168), Expect = 1e-31 Identities = 173/231 (75%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| | || | ||| || ||||| | || ||| ||||| || |||||||| | Sbjct 907826 TCCACCTCTTAGGCGAAGCACAAGATGCAAAGTTGATTCCTTTTGAATGTTATAGTCAGA 907885 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 || || |||||||||||||||||||| || |||||||||||||| ||||| |||| Sbjct 907886 CAGAGTACGTCCGTCTTCTAATTGTTTGCCAGCGAAGATCAGACGTTGTTG---ATCTGG 907942 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 ||||| ||||||||||| || ||||| || || || ||||| || | || || ||| Sbjct 907943 GGGGATACCTTCTTTATCTTGAATTTTTGCCTTTACATTTTCGATTGTGTCAGACGGTTC 908002 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || || || || || |||| || ||||||||||| ||||| Sbjct 908003 AACTTCCAAGGTAATTGTTTTTCCTGTCAATGTTTTGACGAATATTTGCAT 908053 Score = 152 bits (168), Expect = 1e-31 Identities = 178/239 (74%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || || ||||| ||||| | ||| | || ||| |||||||| ||||| || | Sbjct 910563 TCCTCCTCGAAGTCTCAGTACCAAATGCAGTGTAGATTCCTTTTGGATGTTATAATCAGA 910622 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | |||||||||||||||| |||||| || || ||||||||||| ||||| |||||| Sbjct 910623 CAAGGTGCGTCCGTCTTCTAGTTGTTTGCCAGCAAAGATCAGACGTTGTTG---ATCTGG 910679 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 | || |||||||||||||| ||||| || || || || || || | ||| | ||| Sbjct 910680 GGGAATACCTTCTTTATCCTGAATTTTTGCCTTTACATTCTCAATTGTATCTGAGGGTTC 910739 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTAT 288481 ||||| | ||||| || || || || | |||||||| || ||||||||| ||| || Sbjct 910740 CACTTCTAAAGTGATGGTTTTACCAGTTAATGTCTTGACAAAGATCTGCATTCTGTAAT 910798 Score = 145 bits (160), Expect = 2e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 288270 ATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTG 288329 ||| | |||| ||||||||| ||||| ||||| | || || ||||| ||||| ||||| Sbjct 907622 ATGCAACGTGGATTCTTTTTGTATATTGTAGTCTGAAAGAGTACGTCCATCTTCCAATTG 907681 Query 288330 TTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTT 288389 ||| || || || |||| ||| ||||| ||| || ||||||||||| |||||||| Sbjct 907682 TTTGCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGGATTTT 907741 Query 288390 CGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 |||||| |||||||| || | ||| | ||| ||||| | ||||||||||| || || Sbjct 907742 CGCTTTTACGTTTTCAATGGTATCAGAGGGTTCCACTTCCAAAGTGATCGTCTTTCCTGT 907801 Query 288450 CAGAGTCTTGACGAATATCTGCATT 288474 || || || || || || |||||| Sbjct 907802 GAGGGTTTTCACAAAAATTTGCATT 907826 Score = 143 bits (158), Expect = 6e-29 Identities = 164/219 (75%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 ||| ||||| ||||||| ||| ||||||||| || || ||||| | ||| || | || Sbjct 910119 TCTTAGTACCAGATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAGAGAGTTCTGCC 910178 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTC 288374 || |||| |||||| || || ||||| | ||| |||||| |||||| || ||||| Sbjct 910179 ATCCTCTAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGA---TCTGGGGGAATACCTTC 910235 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434 ||||||||| ||||| || ||||| ||||| || | || | ||| ||||| | || Sbjct 910236 TTTATCCTGAATTTTAGCCTTCACATTTTCGATTGTGTCAGATGGTTCAACTTCCAAAGT 910295 Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| || |||| ||| ||||| ||||| ||||| Sbjct 910296 TATCGTCTTTCCTGTCAAAGTTTTGACAAATATTTGCAT 910334 Score = 125 bits (138), Expect = 2e-23 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 |||| ||| || | |||| ||| ||| |||||||| || ||||| | || || | Sbjct 909661 AGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTG 909720 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCT 288372 || ||||| |||||||| || || ||||| ||||| |||||| ||||| |||||| Sbjct 909721 CCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGA---TCTGGAGGAATTCCT 909777 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 ||||||||||| ||||| || || || ||||| || | || | ||| ||||| | Sbjct 909778 TCTTTATCCTGAATTTTAGCCTTGACATTTTCAATTGTGTCAGATGGTTCGACTTCCAAA 909837 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || |||| || |||||||| |||||||| Sbjct 909838 GTTATTGTTTTTCCTGTCAATGTTTTGACGAAAATCTGCAT 909878 Score = 116 bits (128), Expect = 9e-21 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 |||| ||| || | |||| ||| ||| |||||||| || ||||| | || || | Sbjct 908520 AGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTG 908579 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCT 288372 || ||||| |||||||| || || ||||| ||||| ||||| |||||| || ||| Sbjct 908580 CCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGG---TCTGGGGGAATACCT 908636 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 ||||||||||| ||||| || || || || || || | || | ||| ||||| | Sbjct 908637 TCTTTATCCTGAATTTTAGCCTTGACATTCTCGATTGTGTCTGATGGTTCAACTTCCAAA 908696 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || |||| || |||||||| || ||||| Sbjct 908697 GTTATAGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 908737 Score = 116 bits (128), Expect = 9e-21 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 |||| ||| || | |||| ||| ||| ||||||||||| ||||| | || || | Sbjct 908748 AGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCTGACAGGGTCCTG 908807 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCT 288372 || ||||| |||||||| || || ||||| ||||| ||||| |||||| || ||| Sbjct 908808 CCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTG---GTCTGGGGGAATACCT 908864 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 ||||| || || ||||| || || || || || || | || | ||| ||||| | Sbjct 908865 TCTTTGTCTTGAATTTTAGCCTTAACATTCTCGATTGTGTCAGATGGTTCAACTTCCAAA 908924 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| || |||| || |||||||| || ||||| Sbjct 908925 GTTATCGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 908965 Score = 116 bits (128), Expect = 9e-21 Identities = 159/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 |||| ||| || | |||| ||| ||| |||||||| || ||||| | || || | Sbjct 908976 AGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTG 909035 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCT 288372 || ||||| |||||||| || || ||||| ||||| ||||| |||||| || ||| Sbjct 909036 CCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGG---TCTGGGGGAATACCT 909092 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 ||||||||||| ||||| || || || || || || | || | ||| ||||| | Sbjct 909093 TCTTTATCCTGAATTTTAGCCTTGACATTCTCGATTGTGTCTGATGGTTCAACTTCCAAA 909152 Query 288433 GTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| || |||| || |||||||| || ||||| Sbjct 909153 GTTATAGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 909193 Score = 114 bits (126), Expect = 3e-20 Identities = 158/220 (72%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 288258 TCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCC 288317 || ||| || | |||| ||| ||| ||||||||||| ||||| | || || | || Sbjct 910347 TCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCTGAAAGGGTCCTGCC 910406 Query 288318 GTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTC 288374 ||||| | |||||| || || ||||||||||| ||||| ||| ||||| ||||| Sbjct 910407 ATCTTCAAGTTGTTTGCCAGCAAAGATCAGACGTTGTTG---GTCTGGGGGGATACCTTC 910463 Query 288375 TTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGT 288434 |||||||||||||| ||||| || || || || | || | ||| || || | || Sbjct 910464 CTTATCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCAGAAGGTTCAACCTCCAAAGT 910523 Query 288435 GATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || |||| ||| || || || ||||||||| Sbjct 910524 AATTGTTTTACCAGTCAAAGTTTTTACAAAGATCTGCATT 910563 Score = 109 bits (120), Expect = 1e-18 Identities = 159/222 (72%), Gaps = 7/222 (3%) Strand=Plus/Plus Query 288256 AGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGT 288315 |||| ||| || | |||| ||| ||| ||||||||||| ||||| | || || | Sbjct 909203 AGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCTGACAGGGTCCTG 909262 Query 288316 CCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCT 288372 || ||||| |||||||| || || ||||| ||||| ||||| |||||| || ||| Sbjct 909263 CCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTG---GTCTGGGGGAATACCT 909319 Query 288373 TCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGC 288432 ||||| || || ||||| || || || || || || | || | ||| ||||| | Sbjct 909320 TCTTTGTCTTGAATTTTAGCCTTGACATTCTCGATTGTGTCAGATGGTTCAACTTCCAAA 909379 Query 288433 GTGATCGTC-TTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||| || || |||| || |||||||| || ||||| Sbjct 909380 GTTATCGTCTTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 909421 Score = 109 bits (120), Expect = 1e-18 Identities = 142/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||||||||| ||||| | || || | || ||||| |||||||| || || || Sbjct 909459 TTCCTTTTGGATATTGTAGTCCGACAGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAA 909518 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||| ||||| ||||| |||||| || |||||||| || || ||||| || || || Sbjct 909519 GATAAGACGTTGTTG---GTCTGGGGGAATACCTTCTTTGTCTTGAATTTTAGCCTTGAC 909575 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || || | || | ||| ||||| | || |||||||| || |||| || || Sbjct 909576 ATTCTCAATTGTGTCAGATGGTTCAACTTCCAAAGTTATCGTCTTTCCTGTCAATGTTTT 909635 Query 288459 GACGAATATCTGCAT 288473 |||||| || ||||| Sbjct 909636 GACGAAAATTTGCAT 909650 >seq109 Length=465765 Score = 125 bits (138), Expect = 2e-23 Identities = 148/199 (74%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || |||||||| ||||| | | || || || ||||| | |||||| || || || Sbjct 285227 TTCCTTCTGGATATTGTAGTCAGACAAAGTACGACCATCTTCCAGTTGTTTACCAGCAAA 285286 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 ||||| ||| || ||| |||||| ||||| || ||||||||||| || |||||||| Sbjct 285287 GATCAAACGTTGCTGA---TCTGGGGGGATTCCCTCCTTATCCTGGATCTTAGCTTTCAC 285343 Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| |||| ||| | || || || || ||||| ||||| || |||| || || Sbjct 285344 ATTTTCAATAGTATCAGAAGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTTTT 285403 Query 288459 GACGAATATCTGCATTATG 288477 ||| || ||||||||| || Sbjct 285404 GACAAAGATCTGCATTCTG 285422 >seq66 Length=580730 Score = 122 bits (134), Expect = 2e-22 Identities = 159/219 (73%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || ||||| | ||||| || ||| || || || || ||||| | || || | ||| Sbjct 317758 CTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCA 317817 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375 || || | |||||| || ||||| || ||||| || ||| |||||| || |||||| Sbjct 317818 TCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGA---TCTGGGGGAATACCTTCT 317874 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || ||||||||||| || || || ||||| || | || | ||| ||||| || ||| Sbjct 317875 TTGTCCTGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTG 317934 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || |||||||| | ||| || ||||| ||||||||| Sbjct 317935 ATTGTTTTCCCGGTTAAAGTTTTTACGAAAATCTGCATT 317973 Score = 122 bits (134), Expect = 2e-22 Identities = 159/219 (73%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 288259 CTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCG 288318 || ||||| | ||||| || ||| || || || || ||||| | || || | ||| Sbjct 317986 CTGAGTACTAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCA 318045 Query 288319 TCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCT 288375 ||||| | |||||| || ||||| || |||||||| ||| |||||| || |||||| Sbjct 318046 TCTTCAAGTTGTTTACCGGCGAAAATGAGACGCTGCTGA---TCTGGGGGAATACCTTCT 318102 Query 288376 TTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTG 288435 || ||||||||||| || || || ||||| || | || | ||| ||||| || || Sbjct 318103 TTGTCCTGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTA 318162 Query 288436 ATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || ||||| | ||| || ||||| ||||||||| Sbjct 318163 ATTGTTTTTCCGGTTAAAGTTTTTACGAAAATCTGCATT 318201 >seq153 Length=365504 Score = 102 bits (112), Expect = 2e-16 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || | |||| ||| || || ||||| || ||||||| Sbjct 156776 CCACCTCTGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 156835 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| || || || ||||| || |||||||||||||| || || ||| Sbjct 156836 AATGTACGTCCATCCTCCAACTGTTTACCGGCGAAGATCAGACGTTGCTGGTCTGGTGGA 156895 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || |||||||| ||||| || || || || | || | || || Sbjct 156896 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATCGTGTCAGAGGGCTCGACC 156955 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| ||||| || ||||| || || ||||| || |||||| || Sbjct 156956 TCAAGAGTGATGGTCTTGCCAGTCAGCGTTTTCACGAAAATTTGCATTGTG 157006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179608104831714