Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq112 109 1e-18 >seq112 Length=451776 Score = 109 bits (120), Expect = 1e-18 Identities = 270/400 (68%), Gaps = 16/400 (4%) Strand=Plus/Minus Query 297248 TCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATTCCACTC-GAACC 297306 ||| | ||||| ||| | || || |||||| ||| || ||||| ||||| ||| | || Sbjct 444190 TCTCTAGGATTATAATTTGGAATTTTAGTCATCCATCCAGTACCAATTCC-CTCAGCTCC 444132 Query 297307 ATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTC 297366 ||| || |||| | ||||| | || | ||| || |||||||||| || | | ||| Sbjct 444131 ATTTACAAGAACCATAGGAATGATTGGAATATACCACACTGGTTCGATTTTCTGATTGTC 444072 Query 297367 ATCATACAGATATTT---CAGAAGATTATCGTCCGTATCGACGAA-AACCTGTCGAGTCT 297422 |||||| || ||| |||| ||| ||| | || || || | ||||| |||| Sbjct 444071 ATCATATTCATGTTTAAGCAGAGGATCATCTTGCGGATGGAAAATTAACCTCGTGAGT-- 444014 Query 297423 GAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATC 297482 || || ||||||||||||||| | | ||| || ||| || ||||| || | Sbjct 444013 --GGTGACATTTTTGTGAAAATATACCTGGGACTGGCTGAATCTTTTCCACCAGATAAGC 443956 Query 297483 TCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCT 297542 | ||||||||| || ||| | | | || ||||| ||||||||||| | | || Sbjct 443955 GAGTACCGAACTGACCACGAGGCTCTAGCAAATTAATGTTGTTGCTTCCGACGAAGTTCT 443896 Query 297543 GTGCAAGGTTCACGATGGTCCCTTGC--AGAGATGCTTCGCCATGGTGATAGGCGCTATG 297600 | || | || || ||||| | ||| || || |||| ||||| || || || ||| Sbjct 443895 GAGCCAAATTAACAATGGT--CATGCAAAGTGACACTTCACCATGATGGTATGCAGAATG 443838 Query 297601 CTCTGCAACGTAACC-GCTGAACTGTGCAACCTTCACGTC 297639 || || || |||| ||| || || |||||||| || || Sbjct 443837 TTCAGCTACCGAACCTGCT-AATTGAGCAACCTTTACCTC 443799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102836717819050