Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq66 123 2e-23 seq153 100 3e-16 seq5 84.2 2e-11 >seq66 Length=580730 Score = 123 bits (136), Expect = 2e-23 Identities = 156/213 (73%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||||| ||||| ||||| ||||||||||| || | || | ||| || Sbjct 320047 ACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAAAGAGTTCTTCCATCCTCA 320106 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| |||| | || |||||||| || || || || ||||||||| | Sbjct 320107 AGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATACCTTCCTTGTCCTGG 320166 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | ||| | |||||| | | |||||||| | ||| | ||||| Sbjct 320167 ATCTTAGCCTTTACAT-TTCAATGGTGTCTGAAGGTTCGACTTCCAGGGTGATGGTTTTC 320225 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 ||||| | |||||||||||||||||||||| || Sbjct 320226 CCGGTTAAAGTTTTTACAAAAATCTGCATGCCT 320258 Score = 123 bits (136), Expect = 2e-23 Identities = 156/213 (73%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||||| ||||| ||||| ||||||||||| || | || | ||| || Sbjct 320274 ACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGA-AGAGTTCTTCCATCCTCA 320332 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| |||| | || |||||||| || || ||||| ||||||||| | Sbjct 320333 AGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATGCCTTCCTTGTCCTGG 320392 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | ||| | |||||| | | |||||||| | || | ||||| Sbjct 320393 ATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTGATTGTTTTT 320452 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 ||||| | |||||||||||||||||||||| || Sbjct 320453 CCGGTTAAAGTTTTTACAAAAATCTGCATGCCT 320485 Score = 114 bits (126), Expect = 1e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||||| ||||| ||||| ||||||||||| || | || | ||| || Sbjct 319819 ACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAAAGAGTTCTTCCATCCTCA 319878 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| |||| | || |||||||| || || || || ||||||||| | Sbjct 319879 AGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATACCTTCCTTGTCCTGG 319938 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | ||| | |||||| | | |||||||| | || | ||||| Sbjct 319939 ATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTAATTGTTTTT 319998 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || || | ||||||||| |||||||||||| || Sbjct 319999 CCAGTTAAAGTTTTTACGAAAATCTGCATGCCT 320031 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| ||||| ||||||||||| || | || | ||| || Sbjct 320501 ACCAAATGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAAAGGGTTCTTCCATCCTCA 320560 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| |||||| |||| | || || ||||| ||||| ||||| ||||||||| | Sbjct 320561 AGTTGTTTACCAGCGAAGATGAGACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCCTGG 320620 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | ||| | ||| || | | || ||||| | || | |||||| Sbjct 320621 ATCTTAGCCTTTACATTTTCAATGGTATCTGAAGGTTCAACTTCAAGAGTGATGGTTTTG 320680 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || |||| ||||| ||||| ||||||||| Sbjct 320681 CCAGTCAATGTTTTCACAAAGATCTGCATG 320710 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||| || || || || | ||||| || | || || |||||||||||||| |||||| Sbjct 317517 TCCTCCACGCAAACGAAGAACCAAGTGCAATGTGGATTCTTTTTGAATATTATAATCGGA 317576 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || ||| ||| || || ||||| || ||| | || | || ||||| || || || Sbjct 317577 TAAGGTACGACCATCCTCGAGTTGTTTGCCGGCGAAAATAAGACGTTGCTGGTCTGGGGG 317636 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || || |||||||| || || ||| | | ||| | |||||| | | ||||| Sbjct 317637 GATACCTTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCTGAAGGTTCGAC 317696 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | ||||| ||||| | |||||| || ||||||||||| Sbjct 317697 TTCCAGAGTGATTGTTTTCCCGGTTAAAGTTTTGACGAAAATCTGCAT 317744 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| || || ||||| ||||| || | || | ||| || Sbjct 317764 ACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCA 317823 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| | || | || |||||||| || || || || || |||||| | Sbjct 317824 AGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTCCTGG 317883 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | ||| | |||||| | | |||||||| | || | ||||| Sbjct 317884 ATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTGATTGTTTTC 317943 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | ||||||||| ||||||||||| Sbjct 317944 CCGGTTAAAGTTTTTACGAAAATCTGCAT 317972 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | ||||| || || ||||| ||||| || | || | ||| || Sbjct 317992 ACTAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCTTCA 318051 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| | || | ||||||||||| || || || || || |||||| | Sbjct 318052 AGTTGTTTACCGGCGAAAATGAGACGCTGCTGATCTGGGGGAATACCTTCTTTGTCCTGG 318111 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | ||| | |||||| | | |||||||| | || | ||||| Sbjct 318112 ATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTAATTGTTTTT 318171 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | ||||||||| ||||||||||| Sbjct 318172 CCGGTTAAAGTTTTTACGAAAATCTGCAT 318200 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| || || ||||| ||||| || | || | ||| || Sbjct 319136 ACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCA 319195 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| | || | || |||||||| || || || || || |||||| | Sbjct 319196 AGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGCGGAATACCTTCTTTGTCCTGG 319255 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | ||| | |||||| | | |||||||| | || | ||||| Sbjct 319256 ATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTAATTGTTTTT 319315 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || | ||||||||| ||||||||||| Sbjct 319316 CCAGTTAAAGTTTTTACGAAAATCTGCAT 319344 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| || || ||||| ||||| || | || | ||| || Sbjct 319364 ACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCA 319423 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| | || | || |||||||| || || || || || |||||| | Sbjct 319424 AGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTCCTGG 319483 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | ||| | |||||| | |||||||| | || | ||||| Sbjct 319484 ATCTTAGCCTTTACATTTTCAATGGTGTCAGAGGGTTCGACTTCCAGAGTAATTGTTTTT 319543 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | ||||||||| ||||||||||| Sbjct 319544 CCGGTTAAAGTTTTTACGAAAATCTGCAT 319572 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| || || ||||| ||||| || | || | ||| || Sbjct 318907 ACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCA 318966 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| | || | || |||||||| || || || || || |||||| | Sbjct 318967 AGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTCCTGG 319026 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCT-CGACTTCGACGGTCACCGTTTT 127083 || || ||| | | ||| | |||||| | | | ||||||| | || | ||||| Sbjct 319027 ATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGGTTCGACTTCCAGAGTAATTGTTTT 319086 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | ||||||||| ||||||||||| Sbjct 319087 TCCGGTTAAAGTTTTTACGAAAATCTGCAT 319116 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/213 (69%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| || || ||||| ||||| || | || | ||| || Sbjct 319592 ACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCA 319651 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || ||| | || | || |||||||| || || || || || |||||| | Sbjct 319652 AGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTCCTGG 319711 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||| | | ||| | |||||| | | |||||||| | || | ||||| Sbjct 319712 ATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTAATTGTTTT- 319770 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 || || | ||||||||| |||||||||||| || Sbjct 319771 CCAGTTAAAGTTTTTACGAAAATCTGCATGCCT 319803 Score = 82.4 bits (90), Expect = 7e-11 Identities = 145/210 (69%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 || ||||| | ||||| || || ||||| ||||| || | || | ||| || Sbjct 318451 ACTAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCCTCA 318510 Query 126965 AGCTGTTTTCCAG-CGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 || ||||| || | || | || | || |||||||| || || || || || |||||| Sbjct 318511 AGTTGTTTACCGGGCGAAAATGAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTCCTG 318570 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 ||| || ||| | | ||| | |||||| | | |||||||| | || | ||||| Sbjct 318571 GATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTAATTGTTTT 318630 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | ||||||||| ||||||||||| Sbjct 318631 TCCGGTTAAAGTTTTTACGAAAATCTGCAT 318660 >seq153 Length=365504 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 |||||| || | || ||||| || || || ||||| ||| || || || ||| || Sbjct 156793 CACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTACGTCCATCCTC 156852 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 | |||||| || ||| |||||| || ||||| || || || |||||||||||||| Sbjct 156853 CAACTGTTTACCGGCGAAGATCAGACGTTGCTGGTCTGGTGGAATGCCCTCCTTGTCTTG 156912 Query 127024 GATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 |||||| |||| | |||| ||||| | |||||| || | || | || || Sbjct 156913 GATTTTGGCTTTGACATTCTCGATCGTGTCAGAGGGCTCGACCTCAAGAGTGATGGTCTT 156972 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||| ||||| || ||||| ||||| Sbjct 156973 GCCAGTCAGCGTTTTCACGAAAATTTGCAT 157002 >seq5 Length=1768869 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || || || ||||||||||| ||||| | ||||| ||| ||| Sbjct 909898 ACCAAGTGAAGAGTGGATTCCTTTTGAATATTATAATCAGATAAGGTGCGTCCATCTTCT 909957 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || ||||| || || |||| | || || || || ||||| || || ||||| ||| Sbjct 909958 AGTTGTTTGCCGGCAAAGATAAGACGTTGTTGGTCTGGAGGGATACCTTCCTTATCCTGT 910017 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 ||||| ||| | | ||||| ||||| | || ||||| | || | || || Sbjct 910018 ATTTTAGCCTTAACATTTTCGATTGTGTCAGATGGTTCAACTTCCAAAGTTATTGTCTTT 910077 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || |||| ||||| |||||||||||||| Sbjct 910078 CCTGTCAATGTTTTAACAAAAATCTGCAT 910106 Score = 82.4 bits (90), Expect = 7e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 ||||| | ||||| || | || || || ||||| |||||||| || | || | Sbjct 910345 AATCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCTGAAAGGGTCCTG 910404 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || || ||||| ||||| |||||| || || || || || || || || ||| Sbjct 910405 CCATCTTCAAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGGTCTGGGGGGATACCTTCC 910464 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 || ||| |||||| |||| | || | |||||| | | || || || | || Sbjct 910465 TTATCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCAGAAGGTTCAACCTCCAAAGTA 910524 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | ||||| || |||| |||||||||||| |||||||| Sbjct 910525 ATTGTTTTACCAGTCAAAGTTTTTACAAAGATCTGCAT 910562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475482594263120