Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq66 125 5e-24 seq5 123 2e-23 >seq66 Length=580730 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || |||||||| || ||||| ||||| ||| ||||||||| ||||||||||||| Sbjct 317518 CCTCCACGCAAACGAAGAACCAAGTGCAATGTGGATTCTTTTTGAATATTATAATCGGAT 317577 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || || |||| || | |||||| ||| | ||||| | ||| ||||| || | ||| Sbjct 317578 AAGGTACGACCATCCTCGAGTTGTTTGCCGGCGAAAATAAGACGTTGCTGGTCTGGGGGG 317637 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||| ||||| || || || | | | | ||||||| ||| || Sbjct 317638 ATACCTTCCTTGTCTTGAATCTTAGCCTTTACATTTTCAATGGTGTCTGAAGGTTCGACT 317697 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| ||| |||||||| || ||||||||||| ||||| |||||||| Sbjct 317698 TCCAGAGTGATTGTTTTCCCGGTTAAAGTTTTGACGAAAATCTGCAT 317744 Score = 98.7 bits (108), Expect = 7e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 39563 CATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTT 39622 |||| || | |||||| ||| | ||||| | |||||||||||| | ||| | ||||||| Sbjct 318044 CATCTTCAAGTTGTTTACCGGCGAAAATGAGACGCTGCTGATCTGGGGGAATACCTTCTT 318103 Query 39623 TGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAA 39682 |||| ||||| || | | | | ||||| | ||| || |||| ||||| Sbjct 318104 TGTCCTGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTAA 318163 Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||||| || ||||||||||||||||| |||||||| Sbjct 318164 TTGTTTTTCCGGTTAAAGTTTTTACGAAAATCTGCAT 318200 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 ||||||||||| | || ||| || || || || || || | | | | | |||| Sbjct 317761 AGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTTCCATCC 317820 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 || | |||||| ||| | ||||| | ||| |||||||| | ||| | ||||||||||| Sbjct 317821 TCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGGGAATACCTTCTTTGTCC 317880 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 ||||| || | | | | ||||| | ||| || |||| ||| |||||| Sbjct 317881 TGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTGATTGTT 317940 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || ||||||||||||||||| |||||||| Sbjct 317941 TTCCCGGTTAAAGTTTTTACGAAAATCTGCAT 317972 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| |||| ||| | ||||||||||| | || |||||| || ||||| || || | Sbjct 320028 GCCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGA 320087 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | | | | |||| || | |||||| ||| | || || | ||| |||||||| | ||| Sbjct 320088 AAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGG 320147 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | ||||| ||||| || || || | | | | | ||||||| ||| || Sbjct 320148 AATACCTTCCTTGTCCTGGATCTTAGCCTTTA-CATTTCAATGGTGTCTGAAGGTTCGAC 320206 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 |||| || || ||||| || |||||||||||||| || ||||||||| Sbjct 320207 TTCCAGGGTGATGGTTTTCCCGGTTAAAGTTTTTACAAAAATCTGCATG 320255 >seq5 Length=1768869 Score = 123 bits (136), Expect = 2e-23 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || ||||| | | |||||||||||||| || ||| ||||| || |||||||| | | Sbjct 910564 CCTCCTCGAAGTCTCAGTACCAAATGCAGTGTAGATTCCTTTTGGATGTTATAATCAGAC 910623 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || |||| | || || | |||||| || |||| || | ||| || ||||| | ||| Sbjct 910624 AAGGTGCGTCCGTCTTCTAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGGGGA 910683 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTG--TTTA-ATCGTCGCTACTGTGTCTGCGCTTTCC 39669 | |||||||| || | | |||||| |||| || || | | ||| |||| | |||| Sbjct 910684 ATACCTTCTTTATC-CTGAATTTTTGCCTTTACAT--TCTCAATTGTATCTGAGGGTTCC 910740 Query 39670 ACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || ||||| || |||||||| ||||| || || || ||||||||||| Sbjct 910741 ACTTCTAAAGTGATGGTTTTACCAGTTAATGTCTTGACAAAGATCTGCAT 910790 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||| | |||||||| || | |||| ||| ||||| ||||||||||| | Sbjct 909880 CCTCCTCTCAATCTAAGTACCAAGTGAAGAGTGGATTCCTTTTGAATATTATAATCAGAT 909939 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || |||| |||| || | |||||| ||| |||| || | ||| || || || | || Sbjct 909940 AAGGTGCGTCCATCTTCTAGTTGTTTGCCGGCAAAGATAAGACGTTGTTGGTCTGGAGGG 909999 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||| || || |||||| |||| | | | |||||| | ||| || Sbjct 910000 ATACCTTCCTTATCCTGTATTTTAGCCTTAACATTTTCGATTGTGTCAGATGGTTCAACT 910059 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| ||||| || || || || ||||| || || |||||||| Sbjct 910060 TCCAAAGTTATTGTCTTTCCTGTCAATGTTTTAACAAAAATCTGCAT 910106 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || || || | ||||||||||| ||| ||||||||||||||| || || | Sbjct 907599 CCTCCACGTAAGCGTAAAACCAAATGCAACGTGGATTCTTTTTGTATATTGTAGTCTGAA 907658 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | ||| |||| ||||||||||| || ||||||| ||||| || || || | || Sbjct 907659 AGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGA 907718 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||| || ||||| ||| | | | | || || | | |||||| Sbjct 907719 ATACCTTCTTTATCTTGGATTTTCGCTTTTACGTTTTCAATGGTATCAGAGGGTTCCACT 907778 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| || || || || || | ||||| || || || ||||| Sbjct 907779 TCCAAAGTGATCGTCTTTCCTGTGAGGGTTTTCACAAAAATTTGCAT 907825 Score = 96.9 bits (106), Expect = 2e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||| || || ||||| || | ||| ||| ||||| ||||| || || | Sbjct 910336 CCTCCTCTCAATCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCTG-- 910393 Query 39553 AAAACGCGTT--CATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 ||| | | |||| || | |||||| || |||| || | ||| || || || | || Sbjct 910394 AAAGGGTCCTGCCATCTTCAAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGGTCTGGGG 910453 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | | ||||| || || ||||| ||| | || | | ||||| | ||| | Sbjct 910454 GGATACCTTCCTTATCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCAGAAGGTTCAA 910513 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | |||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct 910514 CCTCCAAAGTAATTGTTTTACCAGTCAAAGTTTTTACAAAGATCTGCAT 910562 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || || | ||||||||| ||| ||||| || ||||| || | || | ||| | Sbjct 907839 CGAAGCACAAGATGCAAAGTTGATTCCTTTTGAATGTTATAGTCAGACAGAGTACGTCCG 907898 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || || |||||||| || | || || | ||| || ||||| | ||| | |||||||| Sbjct 907899 TCTTCTAATTGTTTGCCAGCGAAGATCAGACGTTGTTGATCTGGGGGGATACCTTCTTTA 907958 Query 39625 TCGCATATTTTTTG-TTTA-ATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAA 39682 || |||||| |||| || ||| | |||||| | ||| || ||||| |||| Sbjct 907959 TCTTGAATTTTTGCCTTTACATTTTCGAT--TGTGTCAGACGGTTCAACTTCCAAGGTAA 908016 Query 39683 TTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||||| || || || ||||| ||||| || ||||| Sbjct 908017 TTGTTTTTCCTGTCAATGTTTTGACGAATATTTGCAT 908053 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| || || || ||||| || | ||| ||| ||||| ||||| || || | | Sbjct 908739 CCCCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCTGAC 908798 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | | |||| ||||||||||| || |||| || | ||| || || || | ||| Sbjct 908799 AGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGA 908858 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| ||||| |||| || | | |||||| | ||| || Sbjct 908859 ATACCTTCTTTGTCTTGAATTTTAGCCTTAACATTCTCGATTGTGTCAGATGGTTCAACT 908918 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| || || || || || || ||||| ||||| || ||||| Sbjct 908919 TCCAAAGTTATCGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 908965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347356632584279