Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq122 122 1e-22 >seq122 Length=412221 Score = 122 bits (134), Expect = 1e-22 Identities = 431/667 (65%), Gaps = 10/667 (1%) Strand=Plus/Minus Query 154443 ATGGTTCCACTTGGCAGTTGCACAATGAAATTAAATGCAGCAGCAGAACTAATGCCTGTG 154502 ||| | || |||||| |||||||||||| | ||| || || |||| | |||||| Sbjct 114394 ATGATACCTCTTGGCTCATGCACAATGAAACTTAATTCAACAACAGAGATGATGCCTTGT 114335 Query 154503 TCATGGGAAGAGTTTGCTAACGTGCATCCACATACACCTAT-GATACAGACCATGGGTTA 154561 |||| || | || | || | |||||| | | || | ||| ||||| | ||||| Sbjct 114334 TCATTTAAACACTTCACAGACATTCATCCATTTGCCCCATTAGAT-CAGACTCTTGGTTA 114276 Query 154562 TCAGAAAATTATAGATGACTTACAGAAATGGTTATGTGATATCACAGGGTTTGATTCTAT 154621 || || | | | || | | ||| || |||| || || || | || | | Sbjct 114275 CCATCAACTGTTTGCCGAACTTGAAAAAGATTTGTGTGCCATTACTGGTTACGA--CAAA 114218 Query 154622 ATCA--TTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAA 154679 || | || ||||| ||| || | || ||||| ||||| ||| | ||| ||||| Sbjct 114217 ATTAGTTTCCAACCCAACAGTGGTGCCCAAGGTGAATATGCCGGATTAAGAGCCATCCAG 114158 Query 154680 GCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACCAGAGTCAG-- 154737 || ||| ||| ||| ||| | | || | ||||||||||| || | |||| Sbjct 114157 TGTTATCATGAAGCCAAAGGCGATAAACACAGGGACGTATGTTTGATTCCTG--TCAGTG 114100 Query 154738 CACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGT 154797 | || || || || || ||||| ||| ||||| || |||| ||| | | ||||| Sbjct 114099 CCCACGGTACAAACCCAGCTAGCGCTCAAATGGCGGGTATGAGAGTGGAACCTGTCAGAA 114040 Query 154798 GTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACAT 154857 | | | |||||| || ||| | | ||| | || | || || | | ||| | Sbjct 114039 TTAAACAGAATGGTACAATTGACGTAGATGATTTGAAGGAAAAGGCTGAGAAGCATAGAA 113980 Query 154858 TTGAACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACA 154917 | | || ||| | ||||| || ||||| || || | || || || ||| | | Sbjct 113979 ACCGATTATCTTGTCTGATGATCACTTACCCCTCAACCAACGGAGTTTTCGAAGACACCG 113920 Query 154918 TTAGACAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAA 154977 || | | ||| | || |||| | |||||||| || |||||||||||||| || | Sbjct 113919 TTGCGGAAGTGTGTGACATAATTCACAAAAATGGTGGCCAAGTATATCTTGATGGGGCTA 113860 Query 154978 ATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATC 155037 | | ||||| || |||||||| | ||| | || ||||| || || | ||| Sbjct 113859 ACATGAATGCTCAAGTAGGACTTTGCAGACCCGGAGACTATGGAAGTGACGTGTCTCACT 113800 Query 155038 TAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTA 155097 | ||| | || |||||||||||||||||||| |||||||| || || || | || |||| Sbjct 113799 TGAACCTGCACAAAACATTCTGTATTCCACACGGAGGTGGTGGCCCAGGAATGGGCCCTA 113740 Query 155098 TAGGTGT 155104 | ||||| Sbjct 113739 TTGGTGT 113733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579190623389920