Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq122 105 8e-18 >seq122 Length=412221 Score = 105 bits (116), Expect = 8e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 159614 TTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTC 159673 |||| | |||||||| || |||||||||||||| || || | ||||| || ||||| | Sbjct 113898 TTCACAAAAATGGTGGCCAAGTATATCTTGATGGGGCTAACATGAATGCTCAAGTAGGAC 113839 Query 159674 TAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCT 159733 | | ||| | |||||||| || || | ||| | ||| | || || ||||||| Sbjct 113838 TTTGCAGACCCGGAGACTATGGAAGTGACGTGTCTCACTTGAACCTGCACAAAACATTCT 113779 Query 159734 GTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 |||||||||| |||||||| || || || | || ||||||||||| Sbjct 113778 GTATTCCACACGGAGGTGGTGGCCCAGGAATGGGCCCTATTGGTGT 113733 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 158578 TTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGC 158637 |||||| | || ||| | || || ||||| |||||||||||||| || ||||| || || Sbjct 114961 TTAGCATTGCAAACTCGTGAACAACATATTAGAAGAGACAAAGCTACAAGTAATATTTGT 114902 Query 158638 ACAGCACAAGCACTGCTGGCTAATATGTC 158666 ||||| ||||| | |||||||||||||| Sbjct 114901 ACAGCTCAAGCTTTACTGGCTAATATGTC 114873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588028684989680