Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq44 354 1e-92 >seq44 Length=686090 Score = 354 bits (392), Expect = 1e-92 Identities = 579/829 (70%), Gaps = 10/829 (1%) Strand=Plus/Plus Query 36873 ATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCT 36932 || ||||| | ||||||||||||||||||| |||| || || ||||| ||||| ||| Sbjct 254483 ATCACTCCAACTTTTTGATATTCTCCAACTTTCTTTTCAAAGAAGTTTGTTTTTCCATCT 254542 Query 36933 --AGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATG 36990 || ||| |||| || || |||||||| ||||| |||||| || | ||| Sbjct 254543 GTAGAGAT-TATTGTC-ATGAAATCAAAAGGATTTACAACATTATAAATCTTCTCACACC 254600 Query 36991 ATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050 ||||| ||| | ||||| || ||||| || || |||| |||||||| || | | | Sbjct 254601 CCAATTCTGTCAATAATCTATCAGCCACAAACTCAATATATTGACACATTAATTTACAAT 254660 Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110 | || ||||||| | ||||| | ||||| || ||| || ||| || ||||||| Sbjct 254661 TCATGCCAATTAAACTCACTGGTAAAGCATCAGTGAGGAATTCTTGTTCAATGATTACAG 254720 Query 37111 CATCTTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAA---TATTTAA 37167 |||| || |||| | | ||| ||| ||| || | || || | || | Sbjct 254721 CATCGCGAATTATACTTG---TCACTCTTTCCTTTGAAGGTTTTTGTACAAGGTAGGAGA 254777 Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 ||| |||||| ||||||||||| |||| ||||||||| || || || ||||| |||| Sbjct 254778 ACATTAAACAAGCAAAATCACAGTGTAGACCTTCATCCCTTGAAATTAACTCATTTGAAA 254837 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 ||||||| || ||||| | ||| || ||||| | ||| || |||||||||||| |||| Sbjct 254838 AGGTTAAGCCAGGCATAAGACCCCTCTTTTTGAGCCAGAAAATTGCTGCAAAACTGCCAG 254897 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTAT 37347 |||||||||| || ||||| || ||||| ||||||| | ||| ||| | | | | | Sbjct 254898 AAAAGAAAATGCCCTCAACAGCAGCAAAAGCTACAATTCTCTCACCAAAACTGGCATTCT 254957 Query 37348 AATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAA 37407 ||||| || || ||| || ||||| ||||||||| | |||||||| Sbjct 254958 TGCTGCTGATCCAGTTCAATGCCCATTCAGCCTTCTTTTTAACACAAGGTAATGTTTCAA 255017 Query 37408 TTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAAC 37467 | || || || ||||| | ||||| || ||| | || ||||| |||||||| | | Sbjct 255018 TGGCATTGAAAAGAAATTCTTTTTGATCCGGATCACTGATGTAAGTTTCAATTAGCATGC 255077 Query 37468 TATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTT 37527 | |||||||||||||| ||||| ||||| || || ||||| |||||||| |||||||||| Sbjct 255078 TGTACATTTCAGAGTGGATATTCTCAATGGCAATTTGAAATCCATAAAAGCACCTAGCTT 255137 Query 37528 CAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCAC 37587 ||| | || || || | |||| | ||||||| || || || || |||||| Sbjct 255138 CAGTGACCTGCACTTCTTGGCTGAACCGTTCCACTAAGTTCTCGTTCACAATACCATCAG 255197 Query 37588 TAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTT 37647 || |||||||||||||| || | || || || ||||||| | || || || Sbjct 255198 AGGCGGCAAAGAAAGCAAGGACGTGGGAGATGAAGTGCCTTTCATTGTCTGTTAGCTTGA 255257 Query 37648 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 ||||| || | ||| || || || || ||||| || |||||||| Sbjct 255258 CCCAATGATCCAGATCCTTGGACAAGTCCACTTCTTCTGTTGTCCAAAA 255306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592294121670520