Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq286 116 3e-21 >seq286 Length=205596 Score = 116 bits (128), Expect = 3e-21 Identities = 175/249 (70%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 30139 TAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACC 30198 ||||| || ||| || |||| || ||||||||||| ||||||||||||||||| | Sbjct 27338 TAGTCGGCATGCATCCCCTTGTATTCAGCTCCGAAATGTCTCCACTGGAACCCGTAAATG 27397 Query 30199 GGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAA 30258 || |||| ||| ||||| ||||||| || || || | || | ||| || |||| Sbjct 27398 GGGCCCAAGTCGCCCTCCTCCCTGTCCTTCAAACCGACCGAATCGAGAAATTCCCTGGTG 27457 Query 30259 CCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCT 30318 | ||| ||||||||||| | || ||||| || || || | ||| ||||| || Sbjct 27458 CTGTTCGCGTCCCAGATGTGCACGTTCTTCTTTGACAGTTCCAACGCGTTGGTGGAGCCG 27517 Query 30319 CTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGG 30378 | || |||||||| ||| ||||| ||||| | ||| || || | || || || || Sbjct 27518 CGGATGAACCACAACAGTTCCTCGGCGACGCCGCGCCAGAACACGCGTTTCGTTGTCAGC 27577 Query 30379 AGGGGAAAC 30387 || || ||| Sbjct 27578 AGCGGGAAC 27586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408602346177299