Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq44 143 5e-29 >seq44 Length=686090 Score = 143 bits (158), Expect = 5e-29 Identities = 342/510 (67%), Gaps = 14/510 (3%) Strand=Plus/Plus Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||| | ||||||| |||||||||||||||||| || ||| |||||| ||||| Sbjct 254846 CCAGGCATAAGACCCCTCTTTTTGAGCCAGAAAATTGCTGCAAAACTGCCAGAAAAGAAA 254905 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG-A 48309 |||||||| || || || || || | ||||| || ||| || |||||| ||| Sbjct 254906 ATGCCCTCAACAGCAGCAAAAGCTACAATTCTCTCACCAAAACTGGCATTCTTG-CTGCT 254964 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCG 48369 ||||||| | ||||| || |||||||| || | || || | || || ||||| Sbjct 254965 GATCCAGTTCAATGCCCATTCAGCCTTCTTTTTAACACAAGGTAATGTTTCAATGGCATT 255024 Query 48370 G--AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCA-GCTTTGC 48423 | |||| ||||| | | | | || | || || | | |||| ||| Sbjct 255025 GAAAAGAAATTCTT--TTTGATCCGGATCACTGATGTAAGTTTCAATTAGCATGCT---- 255078 Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 |||||| |||||||| | |||||| || || || || || || || ||| ||| || || Sbjct 255079 GTACATTTCAGAGTGGATATTCTCAATGGCAATTTGAAATCCATAAAAGCACCTAGCTTC 255138 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 | |||||||||||| | ||| | |||| | ||||| || || || ||||| || Sbjct 255139 AGTGACCTGCACTTCTTGGCTGAACCGTTCCACTAAGTTCTCGTTCACAATACCATCAGA 255198 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 || |||||||| |||||||| || | ||| || | || |||| || || Sbjct 255199 GGCGGCAAAGAAAGCAAGGACGTGGGAGATGAAGTGCCTTTCATTGTCTGTTAGCTTGAC 255258 Query 48604 CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGC 48663 ||| | | || ||| || |||||||||||| ||||| || || || ||| Sbjct 255259 CCAATGATCCAGATCCTTGGACAAGTCCACTTCTTCTGTTGTCCAAAATGAGGCTTCTGC 255318 Query 48664 TTTTTTGTACATGCCCCATATGTCCGGATA 48693 || ||||| || |||| || || || || Sbjct 255319 TTCCTTGTATTTGGCCCAAATATCTGGGTA 255348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931497133937920