Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq44 141 2e-28 seq308 107 4e-18 seq97 107 4e-18 >seq44 Length=686090 Score = 141 bits (156), Expect = 2e-28 Identities = 301/441 (68%), Gaps = 10/441 (2%) Strand=Plus/Minus Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGCGAGAGA 25653 |||| | || |||||||| |||||||||||||| ||||||||||| | ||| || | Sbjct 255221 ACGTCCTTGCTTTCTTTGCCGCCTCTGATGGTATTGTGAACGAGAACTTAGTG-GAACGG 255163 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | ||||||||| | || || | ||| || || || || || || ||||| Sbjct 255162 TTCAGCCAAGAAGTGCAGGTCACTGAAGCTAGGTGCTTTTATGGATTTCAAATTGCCATT 255103 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || ||| | |||||||| |||| || ||| | || ||||| | || | Sbjct 255102 GAGAATATCCACTCTGAAATGTACAGCATGCTAATTGAAACTTACATCAGTGATCCGGAT 255043 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACAT-ACCCAGCATCAAGAGGAAGGCGCG 25832 | | ||| || || |||||| || |||| ||| | | || | |||||| Sbjct 255042 CAAAAAGAATTTCTTTTCAATGCCATTGAA-ACATTACCTTGTGTTAAAAAGAAGGCTGA 254984 Query 25833 GTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 ||||| |||| ||||||| |||| ||| || | ||||| ||| | | ||||| || Sbjct 254983 ATGGGCATTGAACTGGATCAGCAGCAAGAATGCCAGTTTTGGTGAGAGAATTGTAGCTTT 254924 Query 25893 TGCTGCTGTGGAGGGCATCTT--TTTCAG-CGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||||||||| |||||||| || |||| | | ||| |||| || || ||||||||||| Sbjct 254923 TGCTGCTGTTGAGGGCATTTTCTTTTCTGGCAGTT---TTGCAGCAATTTTCTGGCTCAA 254867 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 ||| ||| ||||| || | |||||| || ||| | || ||||| || || Sbjct 254866 AAAGAGGGGTCTTATGCCTGGCTTAACCTTTTCAAATGAGTTAATTTCAAGGGATGAAGG 254807 Query 26010 TCTCCACAGAGATTTTGCCTG 26030 ||| ||| | |||||||| || Sbjct 254806 TCTACACTGTGATTTTGCTTG 254786 >seq308 Length=193707 Score = 107 bits (118), Expect = 4e-18 Identities = 379/582 (65%), Gaps = 19/582 (3%) Strand=Plus/Plus Query 221996 GCGGGACACATCA--GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCG 222053 ||||| ||||||| ||| | ||||| |||| || || | | ||| || | |||| Sbjct 6382 GCGGG-CACATCAAGGAC-CAAGTGCC-GTTGGTTTCAACGCGTTTCATAAACAAATCCG 6438 Query 222054 GGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCC 222113 ||||||||| || | || | ||||| | || | ||| || || |||| || Sbjct 6439 GGATCCACAAGGCATAGAACAAGTCTCTAGCGCGGTACTCTTCTTTACCCGTGTTCTTTT 6498 Query 222114 TCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGC 222173 ||||||||||||||| ||| || || |||||||| || |||| ||||| ||| | ||| | Sbjct 6499 TCAGATCCAAAAACTGAAAGATATCTGCGTGCCATGGTTCCAAATAGATGGCAAAAGCTC 6558 Query 222174 CGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGG 222233 | |||| |||||||| || || || || || | |||||| | | ||| Sbjct 6559 CAGGTCTTTTGTTGCCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAAAACTCTAAGCA 6618 Query 222234 TCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCA 222293 | || |||| |||||||||| ||| || ||||| ||| || | || || || | Sbjct 6619 TGGGCACCAATCCGTTGGATACACCATTTGTGCCAGCAATATAGGTGCCTTTAGCTCTAA 6678 Query 222294 GGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGA 222353 |||| | | ||| ||||| || || |||||| || ||||| ||| Sbjct 6679 TGTTATGAACGTTAACGCCAATACCGCCTGCAGATTTCGAAATGTATGCGCA----TTGT 6734 Query 222354 GAGTGTCCAT----GATGCCCTCCATAGAGTCCTCCTTGACGT--TCAGCAGAAAACAAG 222407 | | | | || |||||| || || ||| || | | | ||| || ||||| | Sbjct 6735 GCGAGACAATTGAAGATGCCTTCGATGCTGTC--GCTGGGCATCATCAATAGGAAACAGG 6792 Query 222408 ACGACATCTGAGAT-TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 |||| | ||| | | | || | | ||| || ||||| || || |||||||| || || Sbjct 6793 ACGAAAGCTGCGGTCTCGGAGTAGCAGCCG-AGAACAGGGTCGGGCTGGCGTGCGTGAAA 6851 Query 222467 TAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATC 222526 || | |||| || || |||||||| || || |||| | || |||||||| Sbjct 6852 TATTTCTCCGACAGCAAATTATACGTCTCGACCACAGACTCGATATCTTCGCCGTGAATG 6911 Query 222527 TGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA 222568 | |||| | ||| ||||| ||| |||||||||||| Sbjct 6912 CCGACGGCGGCGCGCATCAGCATGTGCTGTGGCCTCTCCACA 6953 >seq97 Length=492714 Score = 107 bits (118), Expect = 4e-18 Identities = 379/582 (65%), Gaps = 19/582 (3%) Strand=Plus/Minus Query 221996 GCGGGACACATCA--GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCG 222053 ||||| ||||||| ||| | ||||| |||| || || | | ||| || | |||| Sbjct 10008 GCGGG-CACATCAAGGAC-CAAGTGCC-GTTGGTTTCAACGCGTTTCATAAACAAATCCG 9952 Query 222054 GGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCC 222113 ||||||||| || | || | ||||| | || | ||| || || |||| || Sbjct 9951 GGATCCACAAGGCATAGAACAAGTCTCTAGCGCGGTACTCTTCTTTACCCGTGTTCTTTT 9892 Query 222114 TCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGC 222173 ||||||||||||||| ||| || || |||||||| || |||| ||||| ||| | ||| | Sbjct 9891 TCAGATCCAAAAACTGAAAGATATCTGCGTGCCATGGTTCCAAATAGATGGCAAAAGCTC 9832 Query 222174 CGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGG 222233 | |||| |||||||| || || || || || | |||||| | | ||| Sbjct 9831 CAGGTCTTTTGTTGCCTCCTTGGTCGACGTATCTGGCGGTGTTGTTGAAAACTCTAAGCA 9772 Query 222234 TCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCA 222293 | || |||| |||||||||| ||| || ||||| ||| || | || || || | Sbjct 9771 TGGGCACCAATCCGTTGGATACACCATTTGTGCCAGCAATATAGGTGCCTTTAGCTCTAA 9712 Query 222294 GGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGA 222353 |||| | | ||| ||||| || || |||||| || ||||| ||| Sbjct 9711 TGTTATGAACGTTAACGCCAATACCGCCTGCAGATTTCGAAATGTATGCGCA----TTGT 9656 Query 222354 GAGTGTCCAT----GATGCCCTCCATAGAGTCCTCCTTGACGT--TCAGCAGAAAACAAG 222407 | | | | || |||||| || || ||| || | | | ||| || ||||| | Sbjct 9655 GCGAGACAATTGAAGATGCCTTCGATGCTGTC--GCTGGGCATCATCAATAGGAAACAGG 9598 Query 222408 ACGACATCTGAGAT-TTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAG 222466 |||| | ||| | | | || | | ||| || ||||| || || |||||||| || || Sbjct 9597 ACGAAAGCTGCGGTCTCGGAGTAGCAGCCG-AGAACAGGGTCGGGCTGGCGTGCGTGAAA 9539 Query 222467 TAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTGAATC 222526 || | |||| || || |||||||| || || |||| | || |||||||| Sbjct 9538 TATTTCTCCGACAGCAAATTATACGTCTCGACCACAGACTCGATATCTTCGCCGTGAATG 9479 Query 222527 TGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCACA 222568 | |||| | ||| ||||| ||| |||||||||||| Sbjct 9478 CCGACGGCGGCGCGCATCAGCATGTGCTGTGGCCTCTCCACA 9437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928809236854720