Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq308 156 2e-33 seq97 156 2e-33 >seq308 Length=193707 Score = 156 bits (172), Expect = 2e-33 Identities = 215/298 (72%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| ||||| || ||||||| ||||| || || ||||| || | |||||||| Sbjct 6425 CATAAACAAATCCGGGATCCACAAGGCATAGAACAAGTCTCTAGCGCGGTACTCTTCTTT 6484 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| |||||||| ||||| || || | ||| ||||||| |||||||||||| |||| Sbjct 6485 ACCCGTG-TTCTTTTTCAGATCCAAAAACTGAAAGATATCTGCGTGCCATGGTTCCAAAT 6543 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 |||| |||||| || |||||| || ||||| || |||||||| || || | | Sbjct 6544 AGATGGCAAAAGCTCCAGGTCTTTTGTTGCCTCCTTGGTCGACGTATCTGGCGGTGTTGT 6603 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171 |||||||| | | ||| || || ||||| | || | || ||||||| | ||| | || Sbjct 6604 TGAAAACTCTAAGCATGGGCACCAATCCGTTGGATACACCATTTGTGCCAGCAATATAGG 6663 Query 26172 ATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229 ||| | | |||||| | ||| | | || || || || || || |||| ||||| Sbjct 6664 TGCCTTTAGCTCTAATGTTATGAACGTTAACGCCAATACCGCCTGCAGATTTCGAAAT 6721 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||||||||||||||||||||| | | | || || ||| | ||||||| | ||| Sbjct 5538 AATTCTCCAGACAAAACTCTTCTGGTGTAAATATTGGATGTGTAAGGTTCAACGGACTCA 5597 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 ||||| ||||| ||||||| ||| ||||| ||||| ||| | || | ||||||| Sbjct 5598 TTATTGCCTAAAATTTGAGCGGTACTGGCTGTGGGCATCGGTGCCAACAACAACGAATTT 5657 Query 25136 CTCAAACCATATTT 25149 | || ||||| ||| Sbjct 5658 CGCACACCATGTTT 5671 >seq97 Length=492714 Score = 156 bits (172), Expect = 2e-33 Identities = 215/298 (72%), Gaps = 2/298 (1%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| ||||| || ||||||| ||||| || || ||||| || | |||||||| Sbjct 9965 CATAAACAAATCCGGGATCCACAAGGCATAGAACAAGTCTCTAGCGCGGTACTCTTCTTT 9906 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| |||||||| ||||| || || | ||| ||||||| |||||||||||| |||| Sbjct 9905 ACCCGTG-TTCTTTTTCAGATCCAAAAACTGAAAGATATCTGCGTGCCATGGTTCCAAAT 9847 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 |||| |||||| || |||||| || ||||| || |||||||| || || | | Sbjct 9846 AGATGGCAAAAGCTCCAGGTCTTTTGTTGCCTCCTTGGTCGACGTATCTGGCGGTGTTGT 9787 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171 |||||||| | | ||| || || ||||| | || | || ||||||| | ||| | || Sbjct 9786 TGAAAACTCTAAGCATGGGCACCAATCCGTTGGATACACCATTTGTGCCAGCAATATAGG 9727 Query 26172 ATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAAT 26229 ||| | | |||||| | ||| | | || || || || || || |||| ||||| Sbjct 9726 TGCCTTTAGCTCTAATGTTATGAACGTTAACGCCAATACCGCCTGCAGATTTCGAAAT 9669 Score = 89.7 bits (98), Expect = 3e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||||||||||||||||||||| | | | || || ||| | ||||||| | ||| Sbjct 10852 AATTCTCCAGACAAAACTCTTCTGGTGTAAATATTGGATGTGTAAGGTTCAACGGACTCA 10793 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 ||||| ||||| ||||||| ||| ||||| ||||| ||| | || | ||||||| Sbjct 10792 TTATTGCCTAAAATTTGAGCGGTACTGGCTGTGGGCATCGGTGCCAACAACAACGAATTT 10733 Query 25136 CTCAAACCATATTT 25149 | || ||||| ||| Sbjct 10732 CGCACACCATGTTT 10719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253030553937725