Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq122 102 9e-17 >seq122 Length=412221 Score = 102 bits (112), Expect = 9e-17 Identities = 429/668 (64%), Gaps = 12/668 (2%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||||||||||| || | || || || |||||||| ||||||||||||||||| || || Sbjct 113733 ACACCAATAGGGCCCATTCCTGGGCCACCACCTCCGTGTGGAATACAGAATGTTTTGTGC 113792 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | || | ||| | || || |||||||| | ||| | || ||||| || ||| Sbjct 113793 AGGTTCAAGTGAGACACGTCACTTCCATAGTCTCCGGGTCTGCAAAGTCCTACTTGAGCA 113852 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | || || ||||| |||||||| || |||||||| | |||| || | ||| | | Sbjct 113853 TTCATGTTAGCCCCATCAAGATATACTTGGCCACCATTTTTGTGAATTATGTCACACA-C 113911 Query 138363 TGTCTGATGTTTGT-TTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 | | | ||| ||| || || || | || || || || || ||||| | ||| || Sbjct 113912 TTCCGCAACGGTGTCTTCGAAAACTCCGTTGGTTGAGGGGTAAGTGATCATCAGACAAGA 113971 Query 138422 GAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCATC 138481 | | | ||| | | || || | || | ||| | | ||| || | |||| Sbjct 113972 TAATCGGTTTCTATGCTTCTCAGCCTTTTCCTTCAAATCATCTACGTCAATTGTACCATT 114031 Query 138482 ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGT 138541 | | | ||||| | | ||| |||| || ||||| || ||||| || || || Sbjct 114032 CTGTTTAATTCTGACAGGTTCCACTCTCATACCCGCCATTTGAGCGCTAGCTGGGTTTGT 114091 Query 138542 TCCATGTG--CTGACTCTGGTATCAGACATACATTTCTTTTATCATCTCCTGATCCTTGA 138599 || || | |||| | || |||| |||||| | || | | ||| ||| ||| | Sbjct 114092 ACCGTGGGCACTGA--CAGGAATCAAACATACGTCCCTGTGTTTATCGCCTTTGGCTTCA 114149 Query 138600 TGATATGCTTGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGCGTTAGGTTGT 138659 ||||| ||||| ||| | ||| ||||| ||||| || | || ||| ||||| Sbjct 114150 TGATAACACTGGATGGCTCTTAATCCGGCATATTCACCTTGGGCACCACTGTTGGGTTGG 114209 Query 138660 AA--TGATATAGAATCAAAACCTGTGATATCACATAACCATTTCTGTAAGTCATCTATTA 138717 || | || | | || |||| || || |||| || ||| | | || | | | Sbjct 114210 AAACTAATTTTG--TCGTAACCAGTAATGGCACACAAATCTTTTTCAAGTTCGGCAAACA 114267 Query 138718 TCTTTTGATAACCCATGGTCTGTATC-ATAGGTGTATGTGGATGCACGTTGGCAAATTCT 138776 | || ||||| | ||||| ||| | || | | |||||| | || | || | | Sbjct 114268 GTTGATGGTAACCAAGAGTCTG-ATCTAATGGGGCAAATGGATGAATGTCTGTGAAGTGT 114326 Query 138777 TCCCATGACACAGGCATCAGTTCTGCTGCTGCATTTAGTTTCATTGTGCAACTACCAAGT 138836 | |||| |||||||| |||| || || ||| |||||||||||||| ||||| Sbjct 114327 TTAAATGAACAAGGCATCATCTCTGTTGTTGAATTAAGTTTCATTGTGCATGAGCCAAGA 114386 Query 138837 GGAACCAT 138844 || | ||| Sbjct 114387 GGTATCAT 114394 Score = 84.2 bits (92), Expect = 3e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 139296 GACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTA 139355 |||||||| || || | ||||| ||||| || || ||||| || ||||||||||||||| Sbjct 114873 GACATATTAGCCAGTAAAGCTTGAGCTGTACAAATATTACTTGTAGCTTTGTCTCTTCTA 114932 Query 139356 ATATGCTGCTCTCTAGTTTGTAGTGCTAA 139384 ||||| || || | |||||| | |||||| Sbjct 114933 ATATGTTGTTCACGAGTTTGCAATGCTAA 114961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578976231598760