Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq146 154 2e-32 >seq146 Length=372164 Score = 154 bits (170), Expect = 2e-32 Identities = 260/373 (70%), Gaps = 4/373 (1%) Strand=Plus/Minus Query 47794 GCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAA 47853 ||||| ||||||||||| ||| ||||||||| ||||| | ||||||||| || || || Sbjct 170424 GCAATTACAAAATCATCTGGTGATTCTTGTTGTAGCATCATCCACATAGCTTCAACGTAG 170365 Query 47854 TCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGC 47913 ||| | |||||||||||||| | | ||| ||||| || || | ||| | | | Sbjct 170364 TCTTTAGCATGTCCCCAGTCTCTTTTGGAATCTAGATTACCCAGTTCCAAAAACTGC-GA 170306 Query 47914 TTACCTTCAGAGATTGCTTTT--AATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCAC 47971 | | | || | | ||| | | | |||||||| || | || ||||| || || | Sbjct 170305 TAATCCCAAGTGGAT-CTTGGCCACTTCCCTTGTAATTTTTCTGGTAACAAACGTCTCTC 170247 Query 47972 CACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATT 48031 | || || ||| |||||||||||| | ||||||| |||| ||| |||| || || | | Sbjct 170246 CTCGCCTGGGACTTTCATGATTAAACAAAATACCATTACACGCAAACATACCATAAGCCT 170187 Query 48032 CACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTG 48091 | | ||| || || |||||||| | || ||||| ||| ||||||| || | | Sbjct 170186 CCCTATAATTAACGACGATCCAGTAAGCGTACAGTTTAGCACATGCATAAGGCGATCTGG 170127 Query 48092 GATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGG 48151 |||| || || ||||| || |||||||| || |||||| ||||| | ||| | Sbjct 170126 GATAAAACGGGGTGGTTTCAGTCTGTGGCACTTCGGCCACCTTCCCATACAATTCCGACG 170067 Query 48152 TGGATGCTTGATA 48164 |||| || ||||| Sbjct 170066 TGGAGGCCTGATA 170054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665468919883160