Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq5 154 3e-32 seq66 136 7e-27 seq109 120 5e-22 seq153 96.9 6e-15 seq10 86.0 1e-11 >seq5 Length=1768869 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||| |||||||||| ||||||||||| | || | ||||| ||| || ||||| Sbjct 910105 ATACCTCCTCTCAATCTTAGTACCAGATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCT 910164 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||||| ||| |||| |||||| || ||||| ||||| | |||||||| || Sbjct 910165 GAGAGAGTTCTGCCATCCTCTAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGG 910224 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||||||||| || ||||| | || | |||| || || || || | ||| Sbjct 910225 GGAATACCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCGATTGTGTCAGATGGTTCA 910284 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | |||||| || || ||||| | ||||| |||||||||||||| Sbjct 910285 ACTTCCAAAGTTATCGTCTTTCCTGTCAAAGTTTTGACAAATATTTGCAT 910334 Score = 131 bits (144), Expect = 3e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 |||| |||||| || | ||||| ||||| ||||| || | || | ||| || Sbjct 907617 ACCAAATGCAACGTGGATTCTTTTTGTATATTGTAGTCTGAAAGAGTACGTCCATCTTCC 907676 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 |||||||| || |||||||| || | ||||| || || || || |||||||||||||| Sbjct 907677 AATTGTTTGCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGG 907736 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 ||||| | ||||| ||| ||| ||||| || | || ||||| | ||| || || || Sbjct 907737 ATTTTCGCTTTTACGTTTTCAATGGTATCAGAGGGTTCCACTTCCAAAGTGATCGTCTTT 907796 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||| || ||||| ||||| ||||||||| Sbjct 907797 CCTGTGAGGGTTTTCACAAAAATTTGCATT 907826 Score = 131 bits (144), Expect = 3e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || |||||||| | ||||| || |||||||| || | || || ||| || Sbjct 907817 AATTTGCATTCCACCTCTTAGGCGAAGCACAAGATGCAAAGTTGATTCCTTTTGAATGTT 907876 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 |||||| || | || | || ||||||||||| || || || || | | ||||| Sbjct 907877 ATAGTCAGACAGAGTACGTCCGTCTTCTAATTGTTTGCCAGCGAAGATCAGACGTTGTTG 907936 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| || || || |||||||||||||| ||||| | |||| |||| || || || || Sbjct 907937 ATCTGGGGGGATACCTTCTTTATCTTGAATTTTTGCCTTTACATTTTCGATTGTGTCAGA 907996 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||||| | || || ||||| ||||| | ||||| || ||||||||||| Sbjct 907997 CGGTTCAACTTCCAAGGTAATTGTTTTTCCTGTCAATGTTTTGACGAATATTTGCAT 908053 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| ||||||| |||||| |||| || | || | || || || || Sbjct 909642 AATTTGCATACCTCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTT 909701 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || || ||| || |||||||| || ||||| || | | ||||| Sbjct 909702 GTAGTCTGACAGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTG 909761 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| |||||||||||||| || ||||| | || | |||| ||| || || || Sbjct 909762 ATCTGGAGGAATTCCTTCTTTATCCTGAATTTTAGCCTTGACATTTTCAATTGTGTCAGA 909821 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| | |||||| ||||| ||||| | ||||| || || || ||||| Sbjct 909822 TGGTTCGACTTCCAAAGTTATTGTTTTTCCTGTCAATGTTTTGACGAAAATCTGCAT 909878 Score = 125 bits (138), Expect = 1e-23 Identities = 170/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||||||||||||| |||| || | || | || || ||||| Sbjct 910327 ATTTGCATACCTCCTCTCAATCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTG 910386 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || | || || ||| || | |||||| || ||||| || | | ||||| Sbjct 910387 TAGTCTGAAAGGGTCCTGCCATCTTCAAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGG 910446 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || || ||||| ||||| || ||||||| ||| | ||| ||| || || ||| Sbjct 910447 TCTGGGGGGATACCTTCCTTATCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCAGAA 910506 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | ||||| || | ||| || |||||||| || | ||||||||||| || |||||| Sbjct 910507 GGTTCAACCTCCAAAGTAATTGTTTTACCAGTCAAAGTTTTTACAAAGATCTGCATT 910563 Score = 120 bits (132), Expect = 5e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || |||| | || ||||||| ||||| ||||| || || || ||||| || Sbjct 910561 ATTCCTCCTCGAAGTCTCAGTACCAAATGCAGTGTAGATTCCTTTTGGATGTTATAATCA 910620 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | || |||| |||||| || ||||| || | | |||||||| || Sbjct 910621 GACAAGGTGCGTCCGTCTTCTAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGG 910680 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||||||||| || ||||| | |||| ||| ||| ||||| || | || Sbjct 910681 GGAATACCTTCTTTATCCTGAATTTTTGCCTTTACATTCTCAATTGTATCTGAGGGTTCC 910740 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 ||||||| ||| || |||||||| |||| || || ||||| || |||||| Sbjct 910741 ACTTCTAAAGTGATGGTTTTACCAGTTAATGTCTTGACAAAGATCTGCATT 910791 Score = 113 bits (124), Expect = 8e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| ||||||| |||||| |||| || | || | || || || || Sbjct 908501 AATTTGCATACCTCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTT 908560 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || || ||| || |||||||| || ||||| || | | ||||| Sbjct 908561 GTAGTCTGACAGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTG 908620 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || ||||||||||| || ||||| | || | ||| || || || || Sbjct 908621 GTCTGGGGGAATACCTTCTTTATCCTGAATTTTAGCCTTGACATTCTCGATTGTGTCTGA 908680 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||||| | ||||||||| || ||||| | ||||| || || |||||||| Sbjct 908681 TGGTTCAACTTCCAAAGTTATAGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 908737 Score = 113 bits (124), Expect = 8e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| ||||||| |||||| |||| || | || | || || || || Sbjct 908957 AATTTGCATACCTCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTT 909016 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || | || || ||| || |||||||| || ||||| || | | ||||| Sbjct 909017 GTAGTCTGACAGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTG 909076 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || || || || ||||||||||| || ||||| | || | ||| || || || || Sbjct 909077 GTCTGGGGGAATACCTTCTTTATCCTGAATTTTAGCCTTGACATTCTCGATTGTGTCTGA 909136 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||||| | ||||||||| || ||||| | ||||| || || |||||||| Sbjct 909137 TGGTTCAACTTCCAAAGTTATAGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 909193 >seq66 Length=580730 Score = 136 bits (150), Expect = 7e-27 Identities = 169/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || |||||||||| |||||||| ||| | ||||| ||||| |||||| ||||| Sbjct 320253 ATGCCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCA 320312 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||||| ||| || | |||||| ||||| || || | | || ||||| || Sbjct 320313 GAAGA-GTTCTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGG 320371 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || || | |||| |||| ||| || || |||| || Sbjct 320372 GGAATGCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCG 320431 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| ||||| || ||||| || |||| ||||||||||| || ||||| Sbjct 320432 ACTTCCAGAGTGATTGTTTTTCCGGTTAAAGTTTTTACAAAAATCTGCAT 320481 Score = 132 bits (146), Expect = 9e-26 Identities = 168/230 (73%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || |||||||||| |||||||| ||| | ||||| ||||| |||||| ||||| Sbjct 320026 ATGCCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCA 320085 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | ||||| ||| || | |||||| ||||| || || | | || ||||| || Sbjct 320086 GAAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGG 320145 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || || || || || | |||| |||| || | || || |||| || Sbjct 320146 GGAATACCTTCCTTGTCCTGGATCTTAGCCTTTACATTTCAA-TGGTGTCTGAAGGTTCG 320204 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || ||||| || |||| ||||||||||| || ||||| Sbjct 320205 ACTTCCAGGGTGATGGTTTTCCCGGTTAAAGTTTTTACAAAAATCTGCAT 320254 >seq109 Length=465765 Score = 120 bits (132), Expect = 5e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||||||||||| || || || || | |||| || || ||||| ||||| || Sbjct 285191 ACCACCTCTCAATCTCAGGACAAGGTGGAGGGTAGATTCCTTCTGGATATTGTAGTCAGA 285250 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 || || | | ||| || | |||||| || ||||| || || | || ||||| || || Sbjct 285251 CAAAGTACGACCATCTTCCAGTTGTTTACCAGCAAAGATCAAACGTTGCTGATCTGGGGG 285310 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 ||||| || ||||| || || || | ||| | |||| ||||||||| |||| ||| || Sbjct 285311 GATTCCCTCCTTATCCTGGATCTTAGCTTTCACATTTTCAATAGTATCAGAAGGCTCGAC 285370 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || || || || || | ||||| ||||| || |||||| Sbjct 285371 CTCAAGGGTGATGGTCTTGCCAGTCAAGGTTTTGACAAAGATCTGCATT 285419 >seq153 Length=365504 Score = 96.9 bits (106), Expect = 6e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 ||||||||||| | || || |||| || | || | ||| || || || |||||| Sbjct 156773 ATACCACCTCTGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 156832 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | ||| || || ||||| ||||| || || | | || || || || Sbjct 156833 GACAATGTACGTCCATCCTCCAACTGTTTACCGGCGAAGATCAGACGTTGCTGGTCTGGT 156892 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || || || ||||| ||||||| ||| | ||| || || || || | ||| Sbjct 156893 GGAATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATCGTGTCAGAGGGCTCG 156952 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || ||||| || || || || || |||||||| || || ||||||||| Sbjct 156953 ACCTCAAGAGTGATGGTCTTGCCAGTCAGCGTTTTCACGAAAATTTGCATT 157003 >seq10 Length=1447555 Score = 86.0 bits (94), Expect = 1e-11 Identities = 313/459 (68%), Gaps = 37/459 (8%) Strand=Plus/Minus Query 46772 ataatatatattataataaac-tgtattatttgac-tattttta-----ataat-atatg 46823 ||||||||||||||| || | | |||||| | |||||||| ||||| |||| Sbjct 300851 ATAATATATATTATATTATATATATATTATATATTATATTTTTATATAAATAATTATATA 300792 Query 46824 ttatggtatatatgtaatttACGATATTTGG-AAATTTTAATATGTTTACTGAT----AT 46878 ||| ||||| |||| || ||| || ||||| |||||| | || || || Sbjct 300791 TTAAATATTATATATAATATATAATAATTAATAAATTATAATATATATAAATATTATTAT 300732 Query 46879 GATATT-TAATAATTGGATAAACTGTATAAAATTAAGAGACATATGTATTATTTTATCTA 46937 ||||| ||||| || ||| | ||| | | || | | ||| ||||||||||| || Sbjct 300731 AATATTATAATATTTATATATTATATATTATAATATAATAT-TATATATTATTTTATATA 300673 Query 46938 TAATAACTATTATAT-TTAATTGTGCATTAACAGTATTAGAATtatactcattcatatat 46996 || || |||||||| ||| | | || | ||||| | |||||| ||| |||||| Sbjct 300672 TATTATATATTATATATTATATATATATATATTATATTATTA-TATACT-ATT-ATATAT 300616 Query 46997 t-taaaacatatacatatat-caaatatagcactatgtataataaataCTTCGttacttt 47054 | || | ||||| |||||| | ||||| | ||| |||| || ||| || || || Sbjct 300615 TATATATTATATATATATATATATATATATTA-TATTTATATTATATA-TTATATA-TTA 300559 Query 47055 taattaatatatt-tata-aatttattat-taatgtatgctatatacttaaatattagaa 47111 || | ||||||| |||| || |||||| || | ||| ||||| ||| |||||| Sbjct 300558 TATATTATATATTATATATTATATATTATATATTATAT-ATATATTATTATATATTA--- 300503 Query 47112 ttatagtaaaaatatttataatactatatattat-tagcatcgcgttgtata-tat-tat 47168 ||| || | |||| |||| || |||||||||| || || || |||| ||| ||| Sbjct 300502 --ATATTATATATATATATATTATTATATATTATATATTAT-ATATTATATATTATATAT 300446 Query 47169 taactaatattaaaatatattcgtatGGTTTTATATCAT 47207 || || ||||| | |||||| ||| | | |||| || Sbjct 300445 TATATATTATTATATTATATTTATATATTATAATATTAT 300407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899619954482160