Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq44 147 6e-30 seq13 109 2e-18 >seq44 Length=686090 Score = 147 bits (162), Expect = 6e-30 Identities = 499/762 (65%), Gaps = 14/762 (2%) Strand=Plus/Minus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGCAAGA 133134 |||||||| ||||| ||| | || || |||||| | || || || ||| ||| Sbjct 255369 TTTGTTATTTTCCCCATTCAATACCCAGATATTTGGGCCAAATACAAGGAAGCAG-AAGC 255311 Query 133135 TTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGG--AAGCC 133192 | ||||||||| || ||||| || || ||||| || | | || |||| |||| Sbjct 255310 CTCATTTTGGACAACAGAAGAAGTGGACTTGTCCAAGGATCTGGATCATTGGGTCAAGC- 255252 Query 133193 CTTACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGAT 133252 | || | |||||| || || || || | | || || ||||| || |||| Sbjct 255251 -TAACAGACAATGAAAGGCACTTCATCTCCCACGTCCTTGCTTTCTTTGCCGCCTCTGAT 255193 Query 133253 GGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCC 133312 |||||||| || || |||| |||||| | |||||| || | | ||||| Sbjct 255192 GGTATTGTGAACGAGAACTTAGTGGAACGGTTCAGCCAAGAAGTGCAGGTCACTGAAGCT 255133 Query 133313 CGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACT 133372 | ||||||||| | || ||||| || || |||||||| ||| | || | Sbjct 255132 AGGTGCTTTTATGGATTTCAAATTGCCATTGAGAATATCCACTCTGAAATGTACAGCATG 255073 Query 133373 CTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATTAGC 133432 |||||||| |||||||||| ||| | | || || | || ||||| |||||| Sbjct 255072 CTAATTGAAACTTACATCAGTGATCCGGATCAAAAAGAATTTCTTTTCAATGCCATTGAA 255013 Query 133433 GAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGA-CAAGCG 133491 ||| |||||| |||||||||| |||| ||||| | || ||||| ||| | |||| Sbjct 255012 ACATTACCTTGTGTTAAAAAGAAGGCTGAATGGGCATTGAACTGGAT-CAGCAGCAAGAA 254954 Query 133492 TGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGG 133551 ||| ||||||| | | | || |||||||||| || ||||||||||| || ||| Sbjct 254953 TGCCAGTTTTGGTGAGAGAATTGTAGCTTTTGCTGCTGTTGAGGGCATTTTCTTTTCTGG 254894 Query 133552 TGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTT 133610 ||| ||| | ||||| ||||| |||||| | ||| || | ||||| | |||| Sbjct 254893 -CAGTTTTGCAGCAATTTTCTGGCTCAAAAAGAGGGGTCTTATGCCTGGCTTAACCTTTT 254835 Query 133611 CTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTTTACTTCACT 133670 | || || | ||||||||||| || | || ||| || ||||| |||| | || Sbjct 254834 CAAATGAGTTAATTTCAAGGGATGAAGGTCTACACTGTGATTTTGCTTGTTTAATGTTCT 254775 Query 133671 CTAAATTAGAGCGACCACTCAAAAAGAATAAGATTGA-AGAAATTATTAGAGAAGCGGTT 133729 | | | | | | || |||| | |||| ||| | || ||| | || || || Sbjct 254774 CCTACCTTGTACAAAAACCTTCAAAGGA-AAGAGTGACAAGTATAATTCGCGATGCTGTA 254716 Query 133730 GAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC-GTGCCGTTTAATTGGTATGAATGA 133788 ||||| ||||| ||| | |||| | || ||| |||||||||| |||||| Sbjct 254715 ATCATTGAACAAGAATTCCTCACTGATGCTTTACCAGTG-AGTTTAATTGGCATGAATTG 254657 Query 133789 TGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAGATT 133830 | | ||| | |||||||| ||||| ||||| ||||| Sbjct 254656 TAAATTAATGTGTCAATATATTGAGTTTGTGGCTGATAGATT 254615 >seq13 Length=1338714 Score = 109 bits (120), Expect = 2e-18 Identities = 186/270 (69%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 302574 TTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGT 302633 ||||||| ||| || |||||||||||||||||||||||| | |||||||| || || Sbjct 884535 TTCCATAGCCTTAATCAAACGACGCTGAATATAACCAGTTTCGGCGGTTTTTACGGCAGT 884476 Query 302634 ATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCC 302693 |||||| ||||| ||||||| ||||| || |||||| | | ||| || || || Sbjct 884475 ATCAATAAGACCTTCACGACCTCCCATGGCGTGGAAGTAGAACTCAGATGGGGTTAAACC 884416 Query 302694 CCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAA 302753 | | | | || | || ||||| || | | || || || ||| ||| | || Sbjct 884415 AGCCAGATATGAATTTTCGACGAATCCTCTGGATTCCGGACCATAATCGTCTTTGATGAA 884356 Query 302754 GTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTG 302813 || ||||| || || || | || | || ||||| ||||| || ||||| || || Sbjct 884355 ATGGGGCAGTGTTCTCTTACGGAAACCAAACGGTATACGTTTTCCTTCTACGTTTTGTTG 884296 Query 302814 TCCCAGGCACGAAATCATCTGCGAAATATT 302843 ||| | || | ||| | ||| |||||||| Sbjct 884295 TCCTACACAGGCAATAACCTGGGAAATATT 884266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471759838978231