Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq68 91.5 2e-12 >seq68 Length=578552 Score = 91.5 bits (100), Expect = 2e-12 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 ||||| | ||||| || || ||| | |||||| || |||| | ||||| || | Sbjct 377423 AGAAGAGAACCGATGATATATCGTCTTGGGACGCCGATTTTTTGAAAGTCGATCAAGGAA 377364 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | || ||||| || || | ||||| || || | || || || ||||||||| | Sbjct 377363 CGCTATTTGAATTAATATTGGCCGCTAATTATTTGGATATTAAAGGTCTGCTCGACGTGA 377304 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 ||||| |||| || |||||||| || |||||| | |||||||| || || || || | Sbjct 377303 CATGCAAAACTGTAGCGAACATGATTAAAGGCAAGGCACCCGAGGAAATTCGTAAAACGT 377244 Query 1592286 TTAACATCAA 1592295 |||||||||| Sbjct 377243 TTAACATCAA 377234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106887835875971