Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq44 93.3 7e-13 >seq44 Length=686090 Score = 93.3 bits (102), Expect = 7e-13 Identities = 195/290 (67%), Gaps = 7/290 (2%) Strand=Plus/Plus Query 794379 GCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAA 794438 ||| ||||| || || | ||| |||||||| || || || |||||||| || || || Sbjct 254845 GCCAGGCATAAGACCCCTCTTTTTGAGCCAGAAAATTGCTGCAAAACTGCCAGAAAAGAA 254904 Query 794439 GATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTT- 794497 |||||||| || || ||||| | || | | ||| ||||| || || |||| Sbjct 254905 AATGCCCTCAACAGCAGCAAAAGCTACAATTCTCTCACCAAAACTG-----GCATTCTTG 254959 Query 794498 -TGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 || ||||||| |||| ||||| || ||||| || | || | || | || || ||| Sbjct 254960 CTGCTGATCCAGTTCAATGCCCATTCAGCCTTCTTTTTAACACAAGGTAATGTTTCAATG 255019 Query 794557 GCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAG 794616 || || || || || | |||| || ||| ||| || || || || | | Sbjct 255020 GCATTGAAAAGAAATTCTTTTTGATCCGGATCACTGATGTAAGTTTCAATTAGCATGCTG 255079 Query 794617 TAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 || | || |||||||| || || ||||| || || || ||||||||||| Sbjct 255080 TACATTTCAGAGTGGATATTCTCAATGGCAATTTGAAATCCATAAAAGCA 255129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915920574719657