Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq66 93.3 3e-14 seq5 91.5 1e-13 seq109 87.8 1e-12 >seq66 Length=580730 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAA-CGGAGGCTG 107613 |||||| ||||| || ||||||||||| || ||||| ||||| | ||| || | || Sbjct 319117 AATGCAGATTTTCGTAAAAACTTTAACCGGAAAAACAATTACTCTGGAAGTCGAACCCTT 319058 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 || || | | | ||||| ||||| || |||||||| | ||| |||| Sbjct 319057 CTGACACCATTGAAAATGTAAAGGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATC 318998 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 |||| | || |||| || |||||||| || ||||| | | ||| | | ||||||| Sbjct 318997 AGCAACGTCTCATTTTCGCCGGTAAACAACTTGAGGATGGAAGAACTCTTTCTGACTACA 318938 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||||| ||||| ||||| | || |||| | |||||| | || |||| Sbjct 318937 ACATTCAGAAGGAATCTACACTTCATTTGGTACTCAGATTGAGGGGAGGAA 318887 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| ||||| || ||||||||||| || ||||| ||||| | ||| || || Sbjct 318888 AATGCAGATTTTCGTAAAAACTTTAACTGGAAAAACAATTACTCTGGAAGTTGAACCTTC 318829 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | ||||| ||||| || |||||||| | ||| | |||| Sbjct 318828 TGACACCATTGAAAATGTAAAGGCTAAGATCCAGGACAAAGAAGGTATTCCCCAG-ATCA 318770 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | || |||| || |||||||| || ||||| | | ||| | | |||||||| Sbjct 318769 GCAACGTCTCATTTTCGCCGGTAAACAACTTGAGGATGGAAGAACTCTTTCTGACTACAA 318710 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||| ||||| ||||| | || |||| | || ||| | || |||| Sbjct 318709 CATTCAGAAGGAATCTACACTTCATTTGGTACTCAGGTTGAGGGGAGGAA 318660 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| ||||| || ||||||||||| || ||||| ||||| | ||| || || Sbjct 319345 AATGCAGATTTTCGTAAAAACTTTAACTGGAAAAACAATTACTCTGGAAGTCGAACCTTC 319286 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | ||||| ||||| || |||||||| | || ||||| Sbjct 319285 TGACACCATTGAAAATGTAAAGGCTAAGATCCAGGACAAAGAAGGTATTCCGCCAGATCA 319226 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | || |||| || |||||||| || ||||| | | ||| | | |||||||| Sbjct 319225 GCAACGTCTCATTTTCGCCGGTAAACAACTTGAGGATGGAAGAACTCTTTCTGACTACAA 319166 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||| ||||| ||||| | || |||| | || ||| | || |||| Sbjct 319165 CATTCAGAAGGAATCTACACTTCATTTGGTACTCAGGTTGAGGGGAGGAA 319116 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||| || ||||||||||| || ||||| ||||| | ||| || || Sbjct 319799 ATGCAGATTTTCGTAAAAACTTTAACTGG-AAAACAATTACTCTGGAAGTCGAACCTTCT 319741 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | ||||| ||||| || |||||||| | ||| |||||| Sbjct 319740 GACACCATTGAAAATGTAAAGGCTAAGATCCAGGACAAAGAAGGTATTCCCCCAGATCAG 319681 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | || |||| || |||||||| || ||||| | | ||| | | ||||||||| Sbjct 319680 CAACGTCTCATTTTCGCCGGTAAACAACTTGAGGATGGAAGAACTCTTTCTGACTACAAC 319621 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||| ||||| ||||| | || |||| | || ||| | || |||| Sbjct 319620 ATTCAGAAGGAATCTACACTTCATTTGGTACTCAGGTTGAGGGGAGGAA 319572 >seq5 Length=1768869 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || |||||||| || ||||| || |||||||| || | ||| ||| | Sbjct 910791 AATGCAGATCTTTGTCAAGACATTAACTGGTAAAACCATCACTTTAGAAGTGGAACCCTC 910732 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | ||||| ||| ||| ||||||||||| | ||| ||||| Sbjct 910731 AGATACAATTGAGAATGTAAAGGCAAAAATTCAGGATAAAGAAGGTATTCCCCCAGATCA 910672 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 || | || || | ||| || ||||| || || |||| || || | || || || Sbjct 910671 ACAACGTCTGATCTTTGCTGGCAAACAACTAGAAGACGGACGCACCTTGTCTGATTATAA 910612 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| |||||||| ||||| |||| |||| ||||| | ||||| |||| Sbjct 910611 CATCCAAAAGGAATCTACACTGCATTTGGTACTGAGACTTCGAGGAGGAA 910562 >seq109 Length=465765 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||||||||| || || ||||| ||||| ||| | || ||| || Sbjct 285419 AATGCAGATCTTTGTCAAAACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCTTC 285360 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | || ||| ||||| ||||| || || | ||| ||||| Sbjct 285359 TGATACTATTGAAAATGTGAAAGCTAAGATCCAGGATAAGGAGGGAATCCCCCCAGATCA 285300 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | | || | ||| |||||||| ||||| || | || || | |||||||| Sbjct 285299 GCAACGTTTGATCTTTGCTGGTAAACAACTGGAAGATGGTCGTACTTTGTCTGACTACAA 285240 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || ||||| ||||| | ||| | || |||||||| |||| || Sbjct 285239 TATCCAGAAGGAATCTACCCTCCACCTTGTCCTGAGATTGAGAGGTGG 285192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398861909804407