Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq44 105 1e-16 >seq44 Length=686090 Score = 105 bits (116), Expect = 1e-16 Identities = 367/563 (65%), Gaps = 15/563 (3%) Strand=Plus/Minus Query 1455716 GAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCGG 1455775 || ||| |||| | || ||||| || ||||| | |||||||| | |||| | | Sbjct 255399 GAACCGTTGCTTAGAGAGAACCCACGTCGATTTGTTATTTTCCCCATTCAATACC--CAG 255342 Query 1455776 ATAT--GGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGAC 1455833 |||| ||| | ||| | ||| | || ||||| |||||||| | || || || ||| Sbjct 255341 ATATTTGGGCCAAATACAAGGAAG-CAGAAGCCTCATTTTGGACAACAGAAGAAGTGGAC 255283 Query 1455834 CTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAG 1455893 | | || || || ||||| ||| | ||| | || | || |||||| Sbjct 255282 TTGTCCAAGGATCTGGATCATTGGGTCAAGCTAACAGACAATGAAAGGCACTTCATCTCC 255223 Query 1455894 CACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCG 1455953 |||||||| || || ||| |||||| ||||| || ||| ||||||| | | | || Sbjct 255222 CACGTCCTTGCTTTCTTT-GCCGCCTCTGATGGTATTGTGAACGAGAACTTAGTGGAACG 255164 Query 1455954 CTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCAT 1456013 || | |||| || || | | || || | | ||||| || || || || ||||| Sbjct 255163 GTTCAGCCAAGAAGTGCAGGTCACTGAAGCTAGGTGCTTTTATGGATTTCAAATTGCCAT 255104 Query 1456014 CGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGT 1456073 || || ||||||||||||| ||| | || || || || ||| ||| || |||| Sbjct 255103 TGAGAATATCCACTCTGAAATGTACAGCATGCTAATTGAAACTTACATCAGTGATCCGGA 255044 Query 1456074 CGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGA 1456133 | || || || || ||||| || || | || | || | || ||||| || Sbjct 255043 TCAAAAAGAATTTCTTTTCAATGCCATTGAAACATTACCTTGTGTTAAAAAGAAGGCTGA 254984 Query 1456134 CTGGGCGATGAAGTGGATCAACA--AGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCG 1456191 ||||| |||| ||||||| || | || ||| |||| ||| | | || | Sbjct 254983 ATGGGCATTGAACTGGATCAGCAGCAAGAATGCC----AGTTTTGGTGAGAGAATTGTAG 254928 Query 1456192 GCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTC 1456249 ||||| || || |||||||| || || || |||||||| ||| || || || |||||| Sbjct 254927 CTTTTGCTGCTGTTGAGGGCATTTTCTTTTCTGGCAGTTT-TGCAGCAATTTTCTGGCTC 254869 Query 1456250 AAGAAGCGCGGCCTCATGCCCGG 1456272 || ||| | || || ||||| || Sbjct 254868 AAAAAGAGGGGTCTTATGCCTGG 254846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177515768020206