Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq44 293 2e-74 >seq44 Length=686090 Score = 293 bits (324), Expect = 2e-74 Identities = 648/961 (67%), Gaps = 17/961 (2%) Strand=Plus/Minus Query 43676 TTGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGG 43735 ||||||| ||| || || | | ||||| | || || |||||||| | || || ||| Sbjct 255393 TTGCTTAGAGAGAACCCACGTCGATTTGTTATTTTCCCCATTCAATACCCAGATATTTGG 255334 Query 43736 --CAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTA 43793 ||||| |||| ||||| | || |||||||||||| |||||||||| || ||| | | Sbjct 255333 GCCAAAT--ACAAGGAAGCAGAAGCCTCATTTTGGACAACAGAAGAAGTGGACTTGTCCA 255276 Query 43794 AAGACTTAGCACATTGGATTGCATTAAAACCACAA-GAAAAACATTTTATATCTTTGGTT 43852 | || | | |||||| | ||| | |||| |||| || || || || || Sbjct 255275 AGGATCTGGATCATTGGGTCAAGCTAACAG-ACAATGAAAGGCACTTCATCTCCCACGTC 255217 Query 43853 TTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCG 43912 | || || ||||| || || || || || || || || || || ||||| Sbjct 255216 CTTGCTTTCTTTGCCGCCTCTGATGGTATTGTGAACGAGAACTTAGTGGAACGGTTCAGC 255157 Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 |||||||| || | | ||||| | || |||||||| |||||||||||||| || ||| Sbjct 255156 CAAGAAGTGCAGGTCACTGAAGCTAGGTGCTTTTATGGATTTCAAATTGCCATTGAGAAT 255097 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCA-CGAGAA 44031 || || || ||||||||||| | || || || || ||||||| ||| | | | | || Sbjct 255096 ATCCACTCTGAAATGTACAGCATGCTAATTGAAACTTACATCAGTGATCCGGATCAAAAA 255037 Query 44032 GCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGC 44091 | || || || ||||| || |||||| ||||| ||||| | || || || ||||| Sbjct 255036 GAATTTCTT-TTCAATGCCATTGAAACATTACCTTGTGTTAAAAAGAAGGCTGAATGGGC 254978 Query 44092 CCTTAAATGGATAAATTCAAATGATTC---TTTTGGAGAACGACTTGTCGCGTTTGCAGT 44148 | || ||||| | || || | |||||| || || |||| || ||||| | Sbjct 254977 ATTGAACTGGATCAGCAGCAAGAATGCCAGTTTTGGTGAGAGAATTGTAGCTTTTGCTGC 254918 Query 44149 TGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGG 44208 ||| || |||||||||||||| || ||||| || || || ||| | || || | || Sbjct 254917 TGTTGAGGGCATTTTCTTTTCTGGCAGTTTTGCAGCAATTTTCTGGCTCAAAAAGAGGGG 254858 Query 44209 TTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTG 44268 | | |||||||| || || ||||||||||||||||| | |||||||| |||| || Sbjct 254857 TCTTATGCCTGGCTTAACCTTTTCAAATGAGTTAATTTCAAGGGATGAAGGTCTACACTG 254798 Query 44269 CGATTTTGCTTGCTTGTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAAT 44328 ||||||||||| || | | || || | | | || |||||| | | | | Sbjct 254797 TGATTTTGCTTGTTTAATGTTCTCCTACCTTGTA---CAAAAACCTTCAAAGGAAAGAGT 254741 Query 44329 TACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACC 44388 ||| ||| || || || |||| || ||||||||||| | || || ||||| Sbjct 254740 GACAAGTATAATTCGCGATGCTGTAATCATTGAACAAGAATTCCTCACTGATGCTTTACC 254681 Query 44389 TGTAAATTTAATAGGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGA 44448 || | |||||| || |||||| || ||| ||||||||||| | | || || Sbjct 254680 AGTGAGTTTAATTGGCATGAATTGTAAATTAATGTGTCAATATATTGAGTTTGTGGCTGA 254621 Query 44449 TCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTT 44508 | | ||| | ||| |||| || || || |||| ||| ||| || |||||||| Sbjct 254620 TAGATTATTGACAGAATTGGGGTGTGAGAAGATTTATAATGTTGTAAATCCTTTTGATTT 254561 Query 44509 TATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATA 44568 ||| || || || || || ||||||||||| |||||||| ||||||||||| Sbjct 254560 CATGACAATAATCTCTACAGATGGAAAAACAAACTTCTTTGAAAAGAAAGTTGGAGAATA 254501 Query 44569 TCAGCGAATGGGCGTCATGATAACAAGTGACAATAAATTTACTACGGATGAAGATTTCTA 44628 ||| | | || || || | |||| ||||| |||| |||| |||| ||||| || Sbjct 254500 TCAAAAAGTTGGAGTGAT--TGACAA-TGACACAGTATTTTCTACAGATGCTGATTTTTA 254444 Query 44629 A 44629 | Sbjct 254443 A 254443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397441162843315