Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq5 113 4e-20 seq153 95.1 1e-14 >seq5 Length=1768869 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||| | ||||||||| |||||||| | |||| |||||||||||||| || || | | Sbjct 907599 CCTCCACGTAAGCGTAAAACCAAATGCAACGTGGATTCTTTTTGTATATTGTAGTCTGAA 907658 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || || ||| | || || | |||||||| ||||| || | ||| || ||||| | || Sbjct 907659 AGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGA 907718 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | ||||| || ||||||| ||| | | | | ||||| | ||||| Sbjct 907719 ATACCTTCTTTATCTTGGATTTTCGCTTTTACGTTTTCAATGGTATCAGAGGGTTCCACT 907778 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| ||||| | ||||| || || ||||| ||||| |||||||| Sbjct 907779 TCCAAAGTGATCGTCTTTCCTGTGAGGGTTTTCACAAAAATTTGCAT 907825 >seq153 Length=365504 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 || ||||| | || | |||||| || || ||| ||| || || || || || |||| Sbjct 156776 CCACCTCTGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 156835 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 | ||| ||| | || || | |||||| || || || || ||||| |||||||| | || Sbjct 156836 AATGTACGTCCATCCTCCAACTGTTTACCGGCGAAGATCAGACGTTGCTGGTCTGGTGGA 156895 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | || ||| ||||| |||||| ||||| || | | ||| || | ||| || Sbjct 156896 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATCGTGTCAGAGGGCTCGACC 156955 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | ||||| | || || ||||||||||| || || |||||||| Sbjct 156956 TCAAGAGTGATGGTCTTGCCAGTCAGCGTTTTCACGAAAATTTGCAT 157002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429529564928519