Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq5 102 7e-17 >seq5 Length=1768869 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| || || | |||| ||| | || ||||| ||||| || ||||| || | | Sbjct 908511 CCTCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGAC 908570 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || || |||||||||||||||||| ||| | ||||| | |||||||||| ||| Sbjct 908571 AGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGA 908630 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | |||||||| || |||||| || |||| | | || |||| | ||| Sbjct 908631 ATACCTTCTTTATCCTGAATTTTAGCCTTGACATTCTCGATTGTGTCTGATG--GTTCAA 908688 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || ||||| || || ||||||||||| | ||||||||||| Sbjct 908689 CTTCCAAAGTTATAGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 908737 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| || || | |||| ||| | || ||||| ||||| |||||||| || | | Sbjct 908739 CCCCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCTGAC 908798 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || || |||||||||||||||||| ||| | ||||| | |||||||||| ||| Sbjct 908799 AGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGA 908858 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | ||||||||||| |||||| || |||| | | || || | | ||| Sbjct 908859 ATACCTTCTTTGTCTTGAATTTTAGCCTTAACATTCTCGATTGTGTCAGATG--GTTCAA 908916 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || || || || || ||||||||||| | ||||||||||| Sbjct 908917 CTTCCAAAGTTATCGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 908965 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| || || | |||| ||| | || ||||| ||||| || ||||| || | | Sbjct 908967 CCTCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGAC 909026 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || || |||||||||||||||||| ||| | ||||| | |||||||||| ||| Sbjct 909027 AGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGA 909086 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | |||||||| || |||||| || |||| | | || |||| | ||| Sbjct 909087 ATACCTTCTTTATCCTGAATTTTAGCCTTGACATTCTCGATTGTGTCTGATG--GTTCAA 909144 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || ||||| || || ||||||||||| | ||||||||||| Sbjct 909145 CTTCCAAAGTTATAGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 909193 Score = 100 bits (110), Expect = 2e-16 Identities = 162/230 (70%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTG-ATTCTTTTTGAATATTGTAATCGGC 101070 || |||| || || | |||| ||| || | || |||| ||||| |||||||| || | Sbjct 909423 CCTCCTCTCAGTCGAAGAACCAAGTGAAAGGGTGGATTCCTTTTGGATATTGTAGTCCGA 909482 Query 101071 CATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGG 101130 || || || |||||||||||||||||| ||| | ||||| | |||||||||| ||| Sbjct 909483 CAGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGG 909542 Query 101131 CACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT-- 101188 | ||||||||||| |||||| || |||| | | || || | | ||| Sbjct 909543 AATACCTTCTTTGTCTTGAATTTTAGCCTTGACATTCTCAATTGTGTCAGATG--GTTCA 909600 Query 101189 GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || || || || || ||||||||||| | ||||||||||| Sbjct 909601 ACTTCCAAAGTTATCGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 909650 Score = 98.7 bits (108), Expect = 8e-16 Identities = 151/212 (71%), Gaps = 5/212 (2%) Strand=Plus/Plus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||| | || ||||| ||||| |||||||| || | || || || ||||||| Sbjct 909212 ACCAAGTGAAGGGTGGATTCCTTTTGGATATTGTAGTCTGACAGGGTCCTGCCATCTTCC 909271 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 ||||||||||| ||| | ||||| | |||||||||| ||| | ||||||||||| | Sbjct 909272 AATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGA 909331 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGT-T 101206 ||||| || |||| | | || || | | ||| ||| | || || || | Sbjct 909332 ATTTTAGCCTTGACATTCTCGATTGTGTCAGATG--GTTCAACTTCCAAAGTTATCGTCT 909389 Query 101207 TTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || ||||||||||| | ||||||||||| Sbjct 909390 TTTCCTGTCAATGTTTTGACGAAAATTTGCAT 909421 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| || || | |||| ||| | || ||||| ||||| || ||||| || | | Sbjct 908283 CCTCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGAC 908342 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || || |||||||||||||||||| ||| | ||||| | |||||||||| ||| Sbjct 908343 AGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGA 908402 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | ||||||||||| |||||| || |||| | | || || | | ||| Sbjct 908403 ATACCTTCTTTGTCTTGAATTTTAGCCTTAACATTCTCGATTGTGTCAGATG--GTTCAA 908460 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || || || || || ||||||||||| | ||||||||||| Sbjct 908461 CTTCCAAAGTTATCGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 908509 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| |||||||| |||| || | ||| |||||||||||||| ||||| || | Sbjct 910108 CCTCCTCTCAATCTTAGTACCAGATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAG 910167 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | |||| || ||| || | ||||||||| ||| | || | | |||||| ||| ||| Sbjct 910168 AGAGTTCTGCCATCCTCTAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGGGGA 910227 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | |||||||| || |||||| ||||||| | | || || | | ||| Sbjct 910228 ATACCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCGATTGTGTCAGATG--GTTCAA 910285 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || || || || || ||||| ||||| | ||| |||||||| Sbjct 910286 CTTCCAAAGTTATCGTCTTTCCTGTCAAAGTTTTGACAAATATTTGCAT 910334 Score = 89.7 bits (98), Expect = 4e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 |||||||||||||| |||||||| || || || | || ||| ||||| |||||| Sbjct 907851 TGCAAAGTTGATTCCTTTTGAATGTTATAGTCAGACAGAGTACGTCCGTCTTCTAATTGT 907910 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 ||||| || | || || | |||||| ||| ||| | |||||||| || ||||||| Sbjct 907911 TTGCCAGCGAAGATCAGACGTTGTTGATCTGGGGGGATACCTTCTTTATCTTGAATTTTT 907970 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAATAGTTTTGCCCG 101213 || |||| | | || || | | ||| ||| | |||||| ||||| || | Sbjct 907971 GCCTTTACATTTTCGATTGTGTCAGACG--GTTCAACTTCCAAGGTAATTGTTTTTCCTG 908028 Query 101214 TCAATGTTTTAATAAAAATTTGCAT 101238 |||||||||| | || |||||||| Sbjct 908029 TCAATGTTTTGACGAATATTTGCAT 908053 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| || || | |||| ||| | || ||||| ||||| || ||||| || | | Sbjct 908055 CCTCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGAC 908114 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | || || |||||||||||||||||| ||| | ||||| | |||||||||| ||| Sbjct 908115 AGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGA 908174 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--G 101189 | ||||| || || |||||| || |||| | | || || | | ||| Sbjct 908175 ATACCTTCCTTATCCTGAATTTTAGCCTTGACATTTTCGATTGTGTCAGATG--GTTCAA 908232 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || || || || || ||||||||||| | ||||||||||| Sbjct 908233 CTTCCAAAGTTATCGTCTTTCCTGTCAATGTTTTGACGAAAATTTGCAT 908281 Score = 82.4 bits (90), Expect = 6e-11 Identities = 164/240 (68%), Gaps = 6/240 (3%) Strand=Plus/Plus Query 101002 ATTACTATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATT 101061 |||| ||| || || || || | ||| |||| ||||| || ||||||||||| ||||| Sbjct 907591 ATTAGTAT--CCTCCACGTAAGCGTAAAACCAAATGCAACGTGGATTCTTTTTGTATATT 907648 Query 101062 GTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTG 101121 ||| || | | ||| |||||||||||||||||| ||| | || | | |||||| Sbjct 907649 GTAGTCTGAAAGAGTACGTCCATCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTG 907708 Query 101122 GTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGT 101181 |||| || | |||||||| || ||||| ||| || | | | || || | Sbjct 907709 GTCTGGTGGAATACCTTCTTTATCTTGGATTTTCGCTTTTACGTTTTCAATGGTATCAGA 907768 Query 101182 GGACGTT--GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || ||| ||| | || || || || || || | ||||| | ||||||||||||| Sbjct 907769 GG--GTTCCACTTCCAAAGTGATCGTCTTTCCTGTGAGGGTTTTCACAAAAATTTGCATT 907826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409645507234317