Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq286 109 4e-19 >seq286 Length=205596 Score = 109 bits (120), Expect = 4e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 27494 CCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCT 27553 || |||| || ||||||||||| ||||| ||||||||||| | || |||| ||| |||| Sbjct 27354 CCTTGTATTCAGCTCCGAAATGTCTCCACTGGAACCCGTAAATGGGGCCCAAGTCGCCCT 27413 Query 27554 CTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGA 27613 | ||||||| || || || | || | ||| || |||| | ||| |||||||||| Sbjct 27414 CCTCCCTGTCCTTCAAACCGACCGAATCGAGAAATTCCCTGGTGCTGTTCGCGTCCCAGA 27473 Query 27614 TCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCA 27673 | | || ||||| || || || | ||| ||||| || | || |||||||| || Sbjct 27474 TGTGCACGTTCTTCTTTGACAGTTCCAACGCGTTGGTGGAGCCGCGGATGAACCACAACA 27533 Query 27674 GCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC 27726 | ||||| ||||| | ||| || || | || || || || || || ||| Sbjct 27534 GTTCCTCGGCGACGCCGCGCCAGAACACGCGTTTCGTTGTCAGCAGCGGGAAC 27586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369493406180753