Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq153 125 2e-23 seq66 113 1e-19 seq5 102 2e-16 >seq153 Length=365504 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | ||| || | ||||| || ||||| || ||||||||||| |||| || || Sbjct 156782 CTGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTA 156841 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||| || | ||| ||||||||||| || | |||||||| | | || || Sbjct 156842 CGTCCATCCTCCAACTGTTTACCGGCGAAGATCAGACGTTGCTGGTCTGGTGGAATGCCC 156901 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 ||||| ||||| ||||| ||||||| |||| | |||| || ||| || |||||| Sbjct 156902 TCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATCGTGTCAGAGGGCTCGACCTCAAGA 156961 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||| || || || |||||||| | |||||| Sbjct 156962 GTGATGGTCTTGCCAGTCAGCGTTTTCACGAAAATTTGCATT 157003 >seq66 Length=580730 Score = 113 bits (124), Expect = 1e-19 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| | |||||| || | |||||| ||||| ||||| || || ||||| || | | || Sbjct 320488 CCTCAATCTGAGTACCAAATGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAAAGGGT 320547 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 ||| ||||| || || ||| || |||||||| || | || || || | | || || Sbjct 320548 TCTTCCATCCTCAAGTTGTTTACCAGCGAAGATGAGACGTTGTTGATCTGGAGGAATGCC 320607 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 |||||| || || || || || ||| | || | | | |||||| || |||||||| Sbjct 320608 TTCCTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTATCTGAAGGTTCAACTTCAAG 320667 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || |||||||| || | || ||||| |||| |||||| Sbjct 320668 AGTGATGGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCAT 320709 Score = 111 bits (122), Expect = 4e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||| || ||||| ||||| || || ||||| || | | |||||| || Sbjct 319812 TCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAAAGAGTTCTTCC 319871 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || ||| ||||||||||| || | ||||| || | | || |||||||| Sbjct 319872 ATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATACCTTCCTT 319931 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || || ||| | || | | |||| ||| || ||||| |||||||| Sbjct 319932 GTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTAAT 319991 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || | ||| || ||||| | |||||| Sbjct 319992 TGTTTTTCCAGTTAAAGTTTTTACGAAAATCTGCAT 320027 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||| || ||||| ||||| || || ||||| || | | |||||| || Sbjct 320040 TCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAAAGAGTTCTTCC 320099 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || ||| ||||||||||| || | ||||| || | | || |||||||| Sbjct 320100 ATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATACCTTCCTT 320159 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || || ||| | || | | |||||||| || ||||| || || || Sbjct 320160 GTCCTGGATCTTAGCCTTTACA-TTTCAATGGTGTCTGAAGGTTCGACTTCCAGGGTGAT 320218 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || | ||| || || || | |||||| Sbjct 320219 GGTTTTCCCGGTTAAAGTTTTTACAAAAATCTGCAT 320254 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || | ||| || ||||| ||||| || || ||||| || | | |||||| || Sbjct 320267 TCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGA-AGAGTTCTTCC 320325 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| || || ||| ||||||||||| || | ||||| || | | || |||||||| Sbjct 320326 ATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATGCCTTCCTT 320385 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || || || || ||| | || | | |||| ||| || ||||| ||||| || Sbjct 320386 GTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACTTCCAGAGTGAT 320445 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || | ||| || || || | |||||| Sbjct 320446 TGTTTTTCCGGTTAAAGTTTTTACAAAAATCTGCAT 320481 >seq5 Length=1768869 Score = 102 bits (112), Expect = 2e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| || || | ||| || ||||| || ||||||||||| ||||| | || || | Sbjct 910573 AGTCTCAGTACCAAATGCAGTGTAGATTCCTTTTGGATGTTATAATCAGACAAGGTGCGT 910632 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 || |||||||| ||| || || ||||| || | || || || | | || ||||| Sbjct 910633 CCGTCTTCTAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGGGGAATACCTTCT 910692 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || ||||||||| || ||| |||| | | ||||| || ||||| | ||| Sbjct 910693 TTATCCTGAATTTTTGCCTTTACATTCTCAATTGTATCTGAGGGTTCCACTTCTAAAGTG 910752 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || ||||| || || | ||||| || |||| ||||||| Sbjct 910753 ATGGTTTTACCAGTTAATGTCTTGACAAAGATCTGCATT 910791 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || |||||||||||||| || | | || || |||||||| | Sbjct 908531 CAAG-TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTGCCATCTTCCA 908589 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || |||||||| | || ||||| | | || ||||| || || |||| Sbjct 908590 ATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGAATACCTTCTTTATCCTGAA 908649 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| |||| | ||||||| || ||||| | ||| ||||| || | Sbjct 908650 TTTTAGCCTTGACATTCTCGATTGTGTCTGATGGTTCAACTTCCAAAGTTATAGTCTTTC 908709 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || ||||| | ||||| Sbjct 908710 CTGTCAATGTTTTGACGAAAATTTGCAT 908737 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || |||||||||||||| || | | || || |||||||| | Sbjct 908987 CAAG-TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTGCCATCTTCCA 909045 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || |||||||| | || ||||| | | || ||||| || || |||| Sbjct 909046 ATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGAATACCTTCTTTATCCTGAA 909105 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| |||| | ||||||| || ||||| | ||| ||||| || | Sbjct 909106 TTTTAGCCTTGACATTCTCGATTGTGTCTGATGGTTCAACTTCCAAAGTTATAGTCTTTC 909165 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || ||||| | ||||| Sbjct 909166 CTGTCAATGTTTTGACGAAAATTTGCAT 909193 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| || || ||||| || || ||||| | ||| || | |||||||||| Sbjct 909900 CAAG-TGAAGAGTGGATTCCTTTTGAATATTATAATCAGATAAGGTGCGTCCATCTTCTA 909958 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| ||||| |||||||| | || ||||| | | ||| |||||||| || || | Sbjct 909959 GTTGTTTGCCGGCAAAGATAAGACGTTGTTGGTCTGGAGGGATACCTTCCTTATCCTGTA 910018 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || ||| | || | |||| || || ||||| | ||| || || || | Sbjct 910019 TTTTAGCCTTAACATTTTCGATTGTGTCAGATGGTTCAACTTCCAAAGTTATTGTCTTTC 910078 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || || || | |||||| Sbjct 910079 CTGTCAATGTTTTAACAAAAATCTGCAT 910106 Score = 87.8 bits (96), Expect = 4e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || |||||||||||||| || | | || || |||||||| | Sbjct 909672 CAAG-TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTGCCATCTTCCA 909730 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || |||||||| | || || || | | |||||||| || || |||| Sbjct 909731 ATTGTTTGCCAGCAAAGATAAGACGTTGTTGATCTGGAGGAATTCCTTCTTTATCCTGAA 909790 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| | || | |||| || || ||||| | ||| || ||||| | Sbjct 909791 TTTTAGCCTTGACATTTTCAATTGTGTCAGATGGTTCGACTTCCAAAGTTATTGTTTTTC 909850 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || ||||| | |||||| Sbjct 909851 CTGTCAATGTTTTGACGAAAATCTGCAT 909878 Score = 87.8 bits (96), Expect = 4e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| || || ||||||||||| || |||||||| |||||||| || | | |||||| || Sbjct 910119 TCTTAGTACCAGATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAGAGAGTTCTGCC 910178 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 ||| ||||| ||| || || ||||| | | || || || | | || ||||| || Sbjct 910179 ATCCTCTAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGGGGAATACCTTCTTT 910238 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || |||||||| || ||| | || | |||| || || ||||| | ||| || Sbjct 910239 ATCCTGAATTTTAGCCTTCACATTTTCGATTGTGTCAGATGGTTCAACTTCCAAAGTTAT 910298 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || | ||| || || || | ||||| Sbjct 910299 CGTCTTTCCTGTCAAAGTTTTGACAAATATTTGCAT 910334 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| | ||| || || ||||| ||||| || || | | ||| | || ||| Sbjct 907842 AGCACAAGATGCAAAGTTGATTCCTTTTGAATGTTATAGTCAGACAGAGTACGTCCGTCT 907901 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 |||| ||| || |||||||| || | || || || | | ||| ||||| || ||| Sbjct 907902 TCTAATTGTTTGCCAGCGAAGATCAGACGTTGTTGATCTGGGGGGATACCTTCTTTATCT 907961 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||||||| || ||| | || | |||| || || ||||| | ||||| ||| Sbjct 907962 TGAATTTTTGCCTTTACATTTTCGATTGTGTCAGACGGTTCAACTTCCAAGGTAATTGTT 908021 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || | || || ||||| | ||||| Sbjct 908022 TTTCCTGTCAATGTTTTGACGAATATTTGCAT 908053 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || |||||||||||||| || | | || || |||||||| | Sbjct 908075 CAAG-TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTGCCATCTTCCA 908133 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || |||||||| | || ||||| | | || |||||||| || |||| Sbjct 908134 ATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGAATACCTTCCTTATCCTGAA 908193 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| |||||| | || | |||| || || ||||| | ||| || || || | Sbjct 908194 TTTTAGCCTTGACATTTTCGATTGTGTCAGATGGTTCAACTTCCAAAGTTATCGTCTTTC 908253 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || ||||| | ||||| Sbjct 908254 CTGTCAATGTTTTGACGAAAATTTGCAT 908281 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || |||||||||||||| || | | || || |||||||| | Sbjct 908303 CAAG-TGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGACAGGGTCCTGCCATCTTCCA 908361 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || |||||||| | || ||||| | | || ||||| || ||||||| Sbjct 908362 ATTGTTTGCCAGCAAAGATAAGACGTTGTTGGTCTGGGGGAATACCTTCTTTGTCTTGAA 908421 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || ||| |||| | |||| || || ||||| | ||| || || || | Sbjct 908422 TTTTAGCCTTAACATTCTCGATTGTGTCAGATGGTTCAACTTCCAAAGTTATCGTCTTTC 908481 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || | || || ||||| | ||||| Sbjct 908482 CTGTCAATGTTTTGACGAAAATTTGCAT 908509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153775518663273