Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq44 333 3e-86 >seq44 Length=686090 Score = 333 bits (368), Expect = 3e-86 Identities = 601/876 (69%), Gaps = 16/876 (2%) Strand=Plus/Plus Query 23159 TTTAAAAATCTTCATCTAAAGTGAATTTCACTGCTTTATCACTATTCATAACACCCATTT 23218 |||||||||| ||||| || ||| |||| | ||| | | || || || | || Sbjct 254442 TTTAAAAATCAGCATCTGTAGAAAAT---ACTG---TGTCATTGTCAATCACTCCAACTT 254495 Query 23219 TTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTTT 23278 |||||||||| ||||| |||| || || ||||| || || ||| || || || Sbjct 254496 TTTGATATTCTCCAACTTTCTTTTCAAAGAAGTTTGTTTTTCCATCTGTAGAGATTATTG 254555 Query 23279 CCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAAAA 23338 ||| |||||||| ||||| | |||||| | | ||| ||||| | || | Sbjct 254556 TCATGAAATCAAAAGGATTTACAACATTATAAATCTTCTCACACCCCAATTCTGTCAATA 254615 Query 23339 GCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGTT 23398 ||||| || ||||| ||||||||||||||||| || | | | || || || |||| Sbjct 254616 ATCTATCAGCCACAAACTCAATATATTGACACATTAATTTACAATTCATGCCAATTAAAC 254675 Query 23399 TTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTAT-- 23456 | ||||| | |||||| | |||| || ||||||| |||||||| |||||| Sbjct 254676 TCACTGGTAAAGCATCAGTGAGGAATTCTTGTTCAATGATTACAGCATCGCGAATTATAC 254735 Query 23457 TTGAACAATAACTTCTTCACTAGGTGGATATTTTAAA---TACTTAAACAATAAACATGC 23513 ||| | ||| ||| | | || | || || | || |||| |||||| || Sbjct 254736 TTG-----TCACTCTTTCCTTTGAAGGTTTTTGTACAAGGTAGGAGAACATTAAACAAGC 254790 Query 23514 AAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGG 23573 ||||||||| ||||| ||||||||||| ||| || ||||| ||||| ||||| || || Sbjct 254791 AAAATCACAGTGTAGACCTTCATCCCTTGAAATTAACTCATTTGAAAAGGTTAAGCCAGG 254850 Query 23574 CATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACC 23633 ||| | || | ||||| | ||| || ||||| ||||| || ||||||||||| || Sbjct 254851 CATAAGACCCCTCTTTTTGAGCCAGAAAATTGCTGCAAAACTGCCAGAAAAGAAAATGCC 254910 Query 23634 CTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCA 23693 ||||||||| ||||| || |||| | |||||| | ||||| | ||||| Sbjct 254911 CTCAACAGCAGCAAAAGCTACAATTCTCTCACCAAAACTGGCATTCTTGCTGCTGATCCA 254970 Query 23694 tttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAG 23753 || || ||| | ||||||| ||| ||||| | ||||||||| || || || || Sbjct 254971 GTTCAATGCCCATTCAGCCTTCTTTTTAACACAAGGTAATGTTTCAATGGCATTGAAAAG 255030 Query 23754 AAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGA 23813 ||| ||||| || ||| | || || || |||||||| | || ||||||||||| Sbjct 255031 AAATTCTTTTTGATCCGGATCACTGATGTAAGTTTCAATTAGCATGCTGTACATTTCAGA 255090 Query 23814 ATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAAC 23873 || ||||| ||||| ||||| ||||| |||||||| || |||||||||| | || || Sbjct 255091 GTGGATATTCTCAATGGCAATTTGAAATCCATAAAAGCACCTAGCTTCAGTGACCTGCAC 255150 Query 23874 ATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAA 23933 || | || | || |||| || ||||| |||||||||||| || |||||||| Sbjct 255151 TTCTTGGCTGAACCGTTCCACTAAGTTCTCGTTCACAATACCATCAGAGGCGGCAAAGAA 255210 Query 23934 AGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAAT 23993 |||||| || | || || || ||||||| || || || ||||| || | Sbjct 255211 AGCAAGGACGTGGGAGATGAAGTGCCTTTCATTGTCTGTTAGCTTGACCCAATGATCCAG 255270 Query 23994 ATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 ||| || || || || ||||| || ||||||||| Sbjct 255271 ATCCTTGGACAAGTCCACTTCTTCTGTTGTCCAAAA 255306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521468033528200