Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq12 194 2e-44
>seq12
Length=2314596
Score = 194 bits (214), Expect = 2e-44
Identities = 413/615 (67%), Gaps = 4/615 (1%)
Strand=Plus/Minus
Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858
|| ||||||||||| ||||| || |||| | || ||| ||||| || || || | |||
Sbjct 281961 TCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATACCAATTAGGCTTACA 281902
Query 16859 GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCA 16918
|| | ||| || || |||||| || || || ||| || || ||| ||| |
Sbjct 281901 GGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCGCGAATTATATCTGTT 281842
Query 16919 ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAA 16978
||||| || | || ||| | || || || |||||| | ||| || ||||| |||
Sbjct 281841 ACTCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACATTAAACAAGCAAAATCACAA 281782
Query 16979 TGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCT 17038
|| || || || || | ||||| || ||||||||||||| || ||||| ||
Sbjct 281781 TGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCAGTCCTGGCATAAGACCC 281722
Query 17039 CGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGAT 17098
|||||||| | |||||| || || || || || |||||||| || || || || | |
Sbjct 281721 CGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGAAAATTCCTTCCACAGCT 281662
Query 17099 GCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACC 17158
||||| || | | |||||| | | | || || | || | | ||||| | | ||
Sbjct 281661 GCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTGCTGATCCAATGAAGAGCC 281602
Query 17159 CACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT--AAATAATTTCTCTT 17216
|| || || || | ||| | ||| ||| ||||| || || || ||| || | ||||
Sbjct 281601 CAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCATTGAAAAGAAAT--TCTT 281544
Query 17217 TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276
| || | | |||| | |||||| || || ||||| || |||||||| || || || |
Sbjct 281543 TCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACATTTCTGAATGGATAT 281484
Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT 17336
| || ||||| || || || || |||||||| || || || | || ||| |||||
Sbjct 281483 TTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTTACTTGTACTTCTTGAC 281424
Query 17337 AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA 17396
||||| || | || ||||| || || || || || || || ||||| || | ||
Sbjct 281423 TGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCAGCAAAAAAGGCAAGTA 281364
Query 17397 TATGCTTAATGAAAT 17411
||| ||||||||
Sbjct 281363 CATGTGAAATGAAAT 281349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517519800351840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |