Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq12 194 2e-44 >seq12 Length=2314596 Score = 194 bits (214), Expect = 2e-44 Identities = 413/615 (67%), Gaps = 4/615 (1%) Strand=Plus/Minus Query 16799 TCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACC 16858 || ||||||||||| ||||| || |||| | || ||| ||||| || || || | ||| Sbjct 281961 TCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATACCAATTAGGCTTACA 281902 Query 16859 GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCA 16918 || | ||| || || |||||| || || || ||| || || ||| ||| | Sbjct 281901 GGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCGCGAATTATATCTGTT 281842 Query 16919 ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAA 16978 ||||| || | || ||| | || || || |||||| | ||| || ||||| ||| Sbjct 281841 ACTCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACATTAAACAAGCAAAATCACAA 281782 Query 16979 TGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCT 17038 || || || || || | ||||| || ||||||||||||| || ||||| || Sbjct 281781 TGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCAGTCCTGGCATAAGACCC 281722 Query 17039 CGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGAT 17098 |||||||| | |||||| || || || || || |||||||| || || || || | | Sbjct 281721 CGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGAAAATTCCTTCCACAGCT 281662 Query 17099 GCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACC 17158 ||||| || | | |||||| | | | || || | || | | ||||| | | || Sbjct 281661 GCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTGCTGATCCAATGAAGAGCC 281602 Query 17159 CACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTT--AAATAATTTCTCTT 17216 || || || || | ||| | ||| ||| ||||| || || || ||| || | |||| Sbjct 281601 CAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCATTGAAAAGAAAT--TCTT 281544 Query 17217 TTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGT 17276 | || | | |||| | |||||| || || ||||| || |||||||| || || || | Sbjct 281543 TCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACATTTCTGAATGGATAT 281484 Query 17277 TCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGT 17336 | || ||||| || || || || |||||||| || || || | || ||| ||||| Sbjct 281483 TTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTTACTTGTACTTCTTGAC 281424 Query 17337 AGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATA 17396 ||||| || | || ||||| || || || || || || || ||||| || | || Sbjct 281423 TGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCAGCAAAAAAGGCAAGTA 281364 Query 17397 TATGCTTAATGAAAT 17411 ||| |||||||| Sbjct 281363 CATGTGAAATGAAAT 281349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517519800351840