Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq12 262 4e-65
>seq12
Length=2314596
Score = 262 bits (290), Expect = 4e-65
Identities = 593/888 (67%), Gaps = 10/888 (1%)
Strand=Plus/Minus
Query 15896 GAAGCAACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCC 15955
|||| || || || |||| || |||| || ||||| ||||| || || || ||
Sbjct 282102 GAAGTGACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCA 282043
Query 15956 TCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTAC 16015
|| || || || | |||||| ||||| ||||| || | | | |||||| |
Sbjct 282042 TCAGTGGAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAA 281983
Query 16016 CCCAGTTCCGTAACTAATCTA---TCTGCTACAAATTCTATATATTGACACATTAAGTCG 16072
|||| || ||||| | || ||||||||||| ||||| ||| |||| | | |
Sbjct 281982 CCCAACTCT---ACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTG 281926
Query 16073 CAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACA 16132
||||| || || || || | ||| || | ||| | |||||||||| ||||| || |
Sbjct 281925 CAATTCATACCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTA 281866
Query 16133 ACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTA 16192
|| || || ||| ||||| || |||| || || ||| | || | | |
Sbjct 281865 ACTGCATCGCGAATTATATCTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGAA 281806
Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252
||||||| ||| || || || ||||| | ||||| || | ||||| || || |||
Sbjct 281805 AACATTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAA 281746
Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312
|| || | |||||||| || |||||||| | ||| || || |||||||| ||
Sbjct 281745 AATGTCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCT 281686
Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372
|||||||| || || || |||| |||||| || | | |||||| | | | || ||||
Sbjct 281685 GAAAAGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTC 281626
Query 16373 TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT 16432
||| | | ||||| | | |||| || || || | || | |||| ||| |||||
Sbjct 281625 TTACTGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCA 281566
Query 16433 ATGGCCTT--AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTA 16490
|| || || ||| || |||| | | | ||| | | | |||||| || ||||| ||
Sbjct 281565 ATAGCATTGAAAAGAAATTCTTTCTCTTCTGGGT--CAAATATATAAGTGTCAATGAGAG 281508
Query 16491 AACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAG 16550
||| ||||||||||| || || || || ||||| || || || ||||| ||||| ||||
Sbjct 281507 TACTATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAG 281448
Query 16551 CCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGT 16610
|||| | || ||||||||| |||| || | ||||| ||||| || || || |
Sbjct 281447 CCTCAGTTACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCAT 281388
Query 16611 CACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAA 16670
|| |||||||||||| || | || || |||||||| |||| ||| || |
Sbjct 281387 CAGATGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACT 281328
Query 16671 TATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCA 16730
||| ||| | | || || || | || |||||||||| ||||| ||| |||
Sbjct 281327 TATCCCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTT 281268
Query 16731 CTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATA 16778
| || | || ||| ||| |||||| || ||||| || |||||||
Sbjct 281267 CAGCTTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATA 281220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511388905992160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |