Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq12 262 4e-65 >seq12 Length=2314596 Score = 262 bits (290), Expect = 4e-65 Identities = 593/888 (67%), Gaps = 10/888 (1%) Strand=Plus/Minus Query 15896 GAAGCAACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCC 15955 |||| || || || |||| || |||| || ||||| ||||| || || || || Sbjct 282102 GAAGTGACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCA 282043 Query 15956 TCTAAAGATATATTTTCCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTAC 16015 || || || || | |||||| ||||| ||||| || | | | |||||| | Sbjct 282042 TCAGTGGAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAA 281983 Query 16016 CCCAGTTCCGTAACTAATCTA---TCTGCTACAAATTCTATATATTGACACATTAAGTCG 16072 |||| || ||||| | || ||||||||||| ||||| ||| |||| | | | Sbjct 281982 CCCAACTCT---ACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTG 281926 Query 16073 CAATTAATTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACA 16132 ||||| || || || || | ||| || | ||| | |||||||||| ||||| || | Sbjct 281925 CAATTCATACCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTA 281866 Query 16133 ACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTA 16192 || || || ||| ||||| || |||| || || ||| | || | | | Sbjct 281865 ACTGCATCGCGAATTATATCTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGAA 281806 Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 ||||||| ||| || || || ||||| | ||||| || | ||||| || || ||| Sbjct 281805 AACATTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAA 281746 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 || || | |||||||| || |||||||| | ||| || || |||||||| || Sbjct 281745 AATGTCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCT 281686 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372 |||||||| || || || |||| |||||| || | | |||||| | | | || |||| Sbjct 281685 GAAAAGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTC 281626 Query 16373 TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT 16432 ||| | | ||||| | | |||| || || || | || | |||| ||| ||||| Sbjct 281625 TTACTGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCA 281566 Query 16433 ATGGCCTT--AAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTA 16490 || || || ||| || |||| | | | ||| | | | |||||| || ||||| || Sbjct 281565 ATAGCATTGAAAAGAAATTCTTTCTCTTCTGGGT--CAAATATATAAGTGTCAATGAGAG 281508 Query 16491 AACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAG 16550 ||| ||||||||||| || || || || ||||| || || || ||||| ||||| |||| Sbjct 281507 TACTATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAG 281448 Query 16551 CCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGT 16610 |||| | || ||||||||| |||| || | ||||| ||||| || || || | Sbjct 281447 CCTCAGTTACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCAT 281388 Query 16611 CACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAA 16670 || |||||||||||| || | || || |||||||| |||| ||| || | Sbjct 281387 CAGATGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACT 281328 Query 16671 TATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCA 16730 ||| ||| | | || || || | || |||||||||| ||||| ||| ||| Sbjct 281327 TATCCCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTT 281268 Query 16731 CTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATA 16778 | || | || ||| ||| |||||| || ||||| || ||||||| Sbjct 281267 CAGCTTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATA 281220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511388905992160