Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq296 127 2e-24 >seq296 Length=775295 Score = 127 bits (140), Expect = 2e-24 Identities = 395/603 (66%), Gaps = 14/603 (2%) Strand=Plus/Plus Query 18615 TTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGG 18674 || || |||||||| ||| ||||| |||||| | | ||| || || ||| || | ||| Sbjct 25404 TTCCCCCTTTTAACGACACGTCGTGTCTTTTGGCGTGGCGTAGTCGAGGAGATGCTGTGG 25463 Query 18675 TTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGAT 18734 || || || || || |||||||||| | | | | | || | ||||||||| Sbjct 25464 TTAATAAAAGGAAGCACAAATGCCAAAGAACTTTCTACCAGAAACGTAAAAATATGGGAT 25523 Query 18735 ATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGAC 18794 | || | ||||| | | | | |||| | || || | || | ||| ||| Sbjct 25524 GTCAACAGTTCGAGGGAGTATTTGGATAGAATGGGGTTTGGGGACCGAGAAGAGGGAGAC 25583 Query 18795 CTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAA 18854 | || || || || || || |||||| | ||||||||||| || |||| || | | | Sbjct 25584 TTGGGTCCGATATATGGGTTTCAGTGGCGTCATTTTGGAGCTGAGTATAGAGGCATGCGA 25643 Query 18855 TCAAACTATTTACAGCAAGGAATCGATCAGCTG---CAAACTGTTATAGATACAATTAAA 18911 | || || | ||||||||||||| || ||| || || ||||||| ||| Sbjct 25644 GCCAATTACGCGAATGAAGGAATCGATCAATTGAGTCAA---GTGATTAATACAATCAAA 25700 Query 18912 ACAAACCCAGAAAGCC-GACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTT 18970 | | || ||| | || | || || ||| || |||||||| ||| || || Sbjct 25701 AATTATCC-GAATGATAGAAGGATAATCTTATGTTCGTGGAATCCTGTGGACATACCACA 25759 Query 18971 AATGGTACTACCTCCATGTCACACGTTATGT-CAGTTTTACGTTGCAAACGGTGAATTAT 19029 ||||| || || || ||||| || || || |||| ||| || | ||||| | Sbjct 25760 AATGGCTCTTCCACCCTGTCATT-GTCTCGTACAATTTTTCGTAAATAATGACGAATTGT 25818 Query 19030 CCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTG 19089 | | ||||||| ||||||| |||||||| || |||||||||||||||||||| Sbjct 25819 CTTCGTTGTTATACCAAAGATCGGCCGATATGGGACTGGGGGTACCGTTCAACATTGCGA 25878 Query 19090 GATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAA 19149 | || || || || || ||| |||| ||||| || || | ||| || | || || | Sbjct 25879 GTTACGCTCTCCTAACGGTCATGATAGCTCATGTGACCGGTTTAAAACCCAGCGAATTTA 25938 Query 19150 TTCATACAATGGGGG--ATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCA 19207 | || || || || | | ||||||||| ||||| ||||| ||||| |||| || Sbjct 25939 TACACACGATTGGCGACAGTCACATATTT--CAAAATCACATAGAAGCTTTGAAAGACCA 25996 Query 19208 GCT 19210 ||| Sbjct 25997 GCT 25999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399484582607460