Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq296 127 2e-24
>seq296
Length=775295
Score = 127 bits (140), Expect = 2e-24
Identities = 395/603 (66%), Gaps = 14/603 (2%)
Strand=Plus/Plus
Query 18615 TTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGG 18674
|| || |||||||| ||| ||||| |||||| | | ||| || || ||| || | |||
Sbjct 25404 TTCCCCCTTTTAACGACACGTCGTGTCTTTTGGCGTGGCGTAGTCGAGGAGATGCTGTGG 25463
Query 18675 TTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGAT 18734
|| || || || || |||||||||| | | | | | || | |||||||||
Sbjct 25464 TTAATAAAAGGAAGCACAAATGCCAAAGAACTTTCTACCAGAAACGTAAAAATATGGGAT 25523
Query 18735 ATATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGAC 18794
| || | ||||| | | | | |||| | || || | || | ||| |||
Sbjct 25524 GTCAACAGTTCGAGGGAGTATTTGGATAGAATGGGGTTTGGGGACCGAGAAGAGGGAGAC 25583
Query 18795 CTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAA 18854
| || || || || || || |||||| | ||||||||||| || |||| || | | |
Sbjct 25584 TTGGGTCCGATATATGGGTTTCAGTGGCGTCATTTTGGAGCTGAGTATAGAGGCATGCGA 25643
Query 18855 TCAAACTATTTACAGCAAGGAATCGATCAGCTG---CAAACTGTTATAGATACAATTAAA 18911
| || || | ||||||||||||| || ||| || || ||||||| |||
Sbjct 25644 GCCAATTACGCGAATGAAGGAATCGATCAATTGAGTCAA---GTGATTAATACAATCAAA 25700
Query 18912 ACAAACCCAGAAAGCC-GACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTT 18970
| | || ||| | || | || || ||| || |||||||| ||| || ||
Sbjct 25701 AATTATCC-GAATGATAGAAGGATAATCTTATGTTCGTGGAATCCTGTGGACATACCACA 25759
Query 18971 AATGGTACTACCTCCATGTCACACGTTATGT-CAGTTTTACGTTGCAAACGGTGAATTAT 19029
||||| || || || ||||| || || || |||| ||| || | ||||| |
Sbjct 25760 AATGGCTCTTCCACCCTGTCATT-GTCTCGTACAATTTTTCGTAAATAATGACGAATTGT 25818
Query 19030 CCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTG 19089
| | ||||||| ||||||| |||||||| || ||||||||||||||||||||
Sbjct 25819 CTTCGTTGTTATACCAAAGATCGGCCGATATGGGACTGGGGGTACCGTTCAACATTGCGA 25878
Query 19090 GATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAA 19149
| || || || || || ||| |||| ||||| || || | ||| || | || || |
Sbjct 25879 GTTACGCTCTCCTAACGGTCATGATAGCTCATGTGACCGGTTTAAAACCCAGCGAATTTA 25938
Query 19150 TTCATACAATGGGGG--ATGCACATATTTACTTGAATCATATAGATGCTTTAAAAGTGCA 19207
| || || || || | | ||||||||| ||||| ||||| ||||| |||| ||
Sbjct 25939 TACACACGATTGGCGACAGTCACATATTT--CAAAATCACATAGAAGCTTTGAAAGACCA 25996
Query 19208 GCT 19210
|||
Sbjct 25997 GCT 25999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399484582607460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |