Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq310 502 3e-137 seq12 333 3e-86 >seq310 Length=366558 Score = 502 bits (556), Expect = 3e-137 Identities = 1233/1856 (66%), Gaps = 29/1856 (2%) Strand=Plus/Plus Query 52829 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 52888 || ||||| || | || ||| ||||| || ||||| | || ||||||| |||||| Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598 Query 52889 TGCATACTTGTTAGT--TTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGAC 52946 || || | | | ||| ||| | || | | | ||||| ||||| | ||| || | Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656 Query 52947 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTT 53006 | || || || |||||||| | ||||| ||||| |||| || || |||| ||||| Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716 Query 53007 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATAG 53063 |||| | ||||||||| | || ||||| || |||| || |||| ||||| | Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776 Query 53064 ATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 53123 | |||| || | | || | || || ||| | |||| ||| | | | ||| || | Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCA 100836 Query 53124 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 53183 || ||||||| | ||| | || || || |||||||||||| || || | | || | Sbjct 100837 AATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTAT 100896 Query 53184 AAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 53243 | | ||| || || ||||| ||||| |||||||| ||||||||||| || ||||| | Sbjct 100897 ATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAG 100956 Query 53244 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTT 53303 | || ||||| || || | | ||| |||||||| |||||| | ||||| ||| Sbjct 100957 CGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGCTT 101016 Query 53304 TTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAA 53363 | | || |||||| ||| | || | || |||| || Sbjct 101017 TCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAA 101076 Query 53364 TACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGT 53422 | || || || | | || | ||| |||| || || || || || ||||| || | | Sbjct 101077 TCCCCTTGCTTACAGGACTA-CCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATT 101135 Query 53423 TCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT 53482 ||||| || || || | |||||||||||| | |||||||| || | | ||| || | Sbjct 101136 TCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTTC 101195 Query 53483 TGTGCTTCCAGGCTATCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTG 53541 ||||| |||| ||| | | || ||| | |||||| || || ||||| ||||| Sbjct 101196 GCAGCTTCAGGGCTGTCATAAGC-TATACGAAGTAAAATAAAAGCATCGGCTAAACCTTG 101254 Query 53542 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 53601 ||||| || || || ||||| || ||| ||| ||| ||| || ||||| | ||||| Sbjct 101255 TACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGATA 101314 Query 53602 ATAATTAATATCTATAATTTTATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAG 53661 |||||||| || |||||||| || |||||| | || |||||| | || || | Sbjct 101315 ATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTAA 101374 Query 53662 TTTGAGAAAATCAAA---TTGTCCATCTA---TTACAAACATGTTCAATGCAATAGATGC 53715 || |||||| | || || ||| |||||||||| |||| ||||| ||||| Sbjct 101375 CTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGATGC 101434 Query 53716 CAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATT 53775 || |||||| || || || || | || | ||||| | || || ||||| | ||| Sbjct 101435 CAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAATT 101494 Query 53776 ACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 53835 || | | || |||||||| ||||||||||| || ||| |||| || ||||| ||||| Sbjct 101495 GCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTATA 101554 Query 53836 AAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACG 53895 || ||||| || || |||||||| | || || | || || || | ||| | | Sbjct 101555 TAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATTTCTG 101614 Query 53896 AGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAA 53955 ||| || | ||| ||||| | |||| ||| || | |||||| ||||||| Sbjct 101615 AGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTCAAA 101674 Query 53956 CTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTC 54015 || ||||||||| || || | ||| ||||||| || |||||||||| ||||| | Sbjct 101675 CTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCAGTG 101734 Query 54016 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 54075 || | | | |||| ||||||||| | ||| || ||||| || || ||| | ||| Sbjct 101735 CCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAATC 101794 Query 54076 TCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 54135 ||| | ||| || || ||||||||||| ||||| | || | || | | || || Sbjct 101795 TCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGTC 101854 Query 54136 AGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 54195 | |||||| ||||| | || || | | | | ||||| | ||||| ||||| ||||| Sbjct 101855 TGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGATC 101914 Query 54196 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACC 54255 || ||||| || |||||| |||| | | ||| |||| | ||| || || | || Sbjct 101915 TACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGCC 101974 Query 54256 ATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCC 54315 ||||| || | || | || || | ||||| ||||| | || || | || Sbjct 101975 GTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAAACC 102034 Query 54316 CCCTGCCATTTTAGAGATTAATGCGCATCGT--TTTAACGTATCATAGATGCCCTCTATA 54373 |||||| |||||| || | || | | || | ||| | | | | ||||| || || Sbjct 102035 ACCTGCCGATTTAGAAATGAGAGCAC-TTGTAGTCAAACAT-TTACAAATGCCTTCAATG 102092 Query 54374 CTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT--TCCC 54430 |||||||| || || || || ||||| || | | ||| | || || |||| Sbjct 102093 CTATCATCAGGCATTGCTACCAAG-AAACACGATGAAA---GCTGAGGTCTTGTGGTCCC 102148 Query 54431 -GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGT 54489 || || | |||||| || || || || || || || | || ||||||||| Sbjct 102149 AGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACGT 102208 Query 54490 CTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTG 54549 || || || | |||||||| | ||||| || || || || ||||| | |||||| Sbjct 102209 TTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGTG 102268 Query 54550 CTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTT 54609 ||||||||||| ||||| || ||| | ||||| | || || ||| |||||||| Sbjct 102269 TTGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTTT 102328 Query 54610 AAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTT 54665 |||||||||||| ||||| ||||| || || || || | ||||| || || |||| Sbjct 102329 AAAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384 >seq12 Length=2314596 Score = 333 bits (368), Expect = 3e-86 Identities = 630/921 (68%), Gaps = 17/921 (2%) Strand=Plus/Minus Query 23835 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAAT 23894 ||||| || ||||| |||||||| || ||||| || ||||| || || || || Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037 Query 23895 GATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAAT 23954 || || || | ||| || || | ||||| |||||||||| || | | | | ||||| Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977 Query 23955 TCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATT 24014 || | | | || || ||||| || ||||| ||||| || |||||||| Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917 Query 24015 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 24074 || || || | || || | ||| |||| | |||||| |||||||| || || || Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857 Query 24075 GTTATAATAGATCTTACTGTTTCTTCACTCGGTGGAT-----ACAATAAATGTTTAAACA 24129 || ||| | ||||| |||| | | ||| | |||||| | | ||||| Sbjct 281856 CGAATTATATCTGTTACTCGCTCTT---TTGATGGTTTTTGAACAATATAAGA--AAACA 281802 Query 24130 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 24189 | ||||| || ||||| || || | ||| || || | | ||| | || || ||||| | Sbjct 281801 TTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATG 281742 Query 24190 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 24249 | ||||| ||||| || || || || || |||||||| || | ||||| ||| |||| Sbjct 281741 TCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAA 281682 Query 24250 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCA- 24308 ||||||||||||| || || ||||| |||| || || |||| | || | | | Sbjct 281681 AGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTAC 281622 Query 24309 TGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 24366 || ||||| | |||||||||| |||||||| || ||||||||||| || || |||| Sbjct 281621 TGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAG 281562 Query 24367 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAT--GTATCAATCAAAAGACT 24424 |||| || ||| | | ||| || | || | || |||| || ||||| | | ||| Sbjct 281561 CATTGAAAAGAAATTCTTTCTCTT--CTGGGTCAAATATATAAGTGTCAATGAGAGTACT 281504 Query 24425 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 24484 ||||||||| ||||| || ||||||||||| ||||| || || || || || | |||||| Sbjct 281503 ATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTC 281444 Query 24485 GGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 24544 || | ||||||||| || |||| ||| | | |||||||| || ||||| ||| Sbjct 281443 AGTTACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGA 281384 Query 24545 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 24604 || |||||||| || | ||||||| || |||| |||| || || | |||| Sbjct 281383 TGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATC 281324 Query 24605 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 24664 ||| | | || ||||| | || |||||||| |||||| || || || || || Sbjct 281323 CCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGC 281264 Query 24665 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGG 24724 | || ||| | | ||| ||||| |||||||||| ||||| || || || || |||| Sbjct 281263 TTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGG 281204 Query 24725 ATTTTTTGCAAGGATTGGTTC 24745 ||||| | ||| | |||||| Sbjct 281203 ATTTTCTCTAAGCAATGGTTC 281183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593692002978240