Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq218 93.3 4e-14 seq428 89.7 4e-13 seq44 86.0 5e-12 >seq218 Length=661058 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | || || | || || ||||| || || ||| ||||| || Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || |||| ||||||| || |||||||| | || |||||| Sbjct 356620 GATACAATTGAGAATGTTAAAGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCAG 356561 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || || | |||||||| || ||||||||||||||| || | || | ||||||| | Sbjct 356560 CAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCT--CCGATTATA 356503 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||| || ||||| ||||| || |||| | |||| ||||||| Sbjct 356502 ATATTCAAAAAGAATCCACTCTCCATTTGGTACTCAGATTGAGAGGAGG 356454 >seq428 Length=160056 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||||||| | || || || ||||| || ||||| || || ||||| | Sbjct 129444 ATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTCC 129503 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| |||||| ||||||||||| | || || ||| Sbjct 129504 GATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCAA 129563 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | || || ||||| || |||||| |||||||| | ||| || | |||||||| Sbjct 129564 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAAC 129623 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||| || | || |||| ||| |||| | ||||| Sbjct 129624 ATCCAAAAGGAATCGACATTGCATTTGGTCTTAAGATTGAGGGGAGG 129670 >seq44 Length=1668621 Score = 86.0 bits (94), Expect = 5e-12 Identities = 177/260 (68%), Gaps = 9/260 (3%) Strand=Plus/Plus Query 25937 CACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTGCACGTCGGCCGGTGAG 25996 ||||| ||||| |||||||||| ||| |||| | |||||| || | || ||||||| Sbjct 465915 CACGGATTTCATGTGCACGAATTTGGTGACAACACCAACGGCTGTATTTCAGCCGGTGCT 465974 Query 25997 CACTTTAATCCCACCAATGAGGACCACGGCGCTCCCGATGCTGAAATTAGGCATGTTGGC 26056 || || ||||| || | || || || ||||| ||||| || | || || |||||| Sbjct 465975 CATTTCAATCCGCATAACAAAGATCATGGAGCTCCTGATGCAGACGTGAGACACGTTGGC 466034 Query 26057 GACTTGGGCAACATAAAATCGGCTGGCTACAATTCACTGACCG---AAGTAAACATGATG 26113 || | || ||| || || || ||| ||| | | | || ||||||| || | Sbjct 466035 GATCTTGGAAACGTAGAA---GCCGGCGACA--TGGGT-AGCGCAAAAGTAAATATAACT 466088 Query 26114 GACAACGTTATGTCTCTATATGGCCCGCATAATATTATCGGAAGAAGTTTGGTCGTGCAC 26173 ||||| | || || || | |||| ||||||||||| || | | |||||| || || Sbjct 466089 GACAAATTAATATCACTTTCTGGCGAACATAATATTATTGGTCGTACTTTGGTTGTTCAT 466148 Query 26174 ACGGACAAAGACGATTTGGG 26193 | ||| ||||| || || Sbjct 466149 GCCGACCCTGACGACTTAGG 466168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428315181264140