Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq218 93.3 4e-14
seq428 89.7 4e-13
seq44 86.0 5e-12
>seq218
Length=661058
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| ||| | || || | || || ||||| || || ||| ||||| ||
Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || |||| ||||||| || |||||||| | || ||||||
Sbjct 356620 GATACAATTGAGAATGTTAAAGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCAG 356561
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139
|| || | |||||||| || ||||||||||||||| || | || | ||||||| |
Sbjct 356560 CAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCT--CCGATTATA 356503
Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
||||||| || ||||| ||||| || |||| | |||| |||||||
Sbjct 356502 ATATTCAAAAAGAATCCACTCTCCATTTGGTACTCAGATTGAGAGGAGG 356454
>seq428
Length=160056
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||||||| | || || || ||||| || ||||| || || ||||| |
Sbjct 129444 ATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTCC 129503
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | ||| |||||| ||||||||||| | || || |||
Sbjct 129504 GATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCAA 129563
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
||| | || || ||||| || |||||| |||||||| | ||| || | ||||||||
Sbjct 129564 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAAC 129623
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| || |||||||| || | || |||| ||| |||| | |||||
Sbjct 129624 ATCCAAAAGGAATCGACATTGCATTTGGTCTTAAGATTGAGGGGAGG 129670
>seq44
Length=1668621
Score = 86.0 bits (94), Expect = 5e-12
Identities = 177/260 (68%), Gaps = 9/260 (3%)
Strand=Plus/Plus
Query 25937 CACGGCTTTCACGTGCACGAATATGGCGACACGAGCAACGGTTGCACGTCGGCCGGTGAG 25996
||||| ||||| |||||||||| ||| |||| | |||||| || | || |||||||
Sbjct 465915 CACGGATTTCATGTGCACGAATTTGGTGACAACACCAACGGCTGTATTTCAGCCGGTGCT 465974
Query 25997 CACTTTAATCCCACCAATGAGGACCACGGCGCTCCCGATGCTGAAATTAGGCATGTTGGC 26056
|| || ||||| || | || || || ||||| ||||| || | || || ||||||
Sbjct 465975 CATTTCAATCCGCATAACAAAGATCATGGAGCTCCTGATGCAGACGTGAGACACGTTGGC 466034
Query 26057 GACTTGGGCAACATAAAATCGGCTGGCTACAATTCACTGACCG---AAGTAAACATGATG 26113
|| | || ||| || || || ||| ||| | | | || ||||||| || |
Sbjct 466035 GATCTTGGAAACGTAGAA---GCCGGCGACA--TGGGT-AGCGCAAAAGTAAATATAACT 466088
Query 26114 GACAACGTTATGTCTCTATATGGCCCGCATAATATTATCGGAAGAAGTTTGGTCGTGCAC 26173
||||| | || || || | |||| ||||||||||| || | | |||||| || ||
Sbjct 466089 GACAAATTAATATCACTTTCTGGCGAACATAATATTATTGGTCGTACTTTGGTTGTTCAT 466148
Query 26174 ACGGACAAAGACGATTTGGG 26193
| ||| ||||| || ||
Sbjct 466149 GCCGACCCTGACGACTTAGG 466168
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428315181264140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |