Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq428 98.7 8e-16
seq218 95.1 1e-14
>seq428
Length=160056
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||||||| | || || || ||||| || ||||| || || ||||| |
Sbjct 129444 ATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTCC 129503
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| |||||| ||||||||||| | || || |||
Sbjct 129504 GATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCAA 129563
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
||| | || || ||||| || ||||||||||||||| | ||| || | ||||||||
Sbjct 129564 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAAC 129623
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| ||||||||||| || | || |||| ||| |||| | |||||
Sbjct 129624 ATCCAAAAGGAATCGACATTGCATTTGGTCTTAAGATTGAGGGGAGG 129670
>seq218
Length=661058
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| |||||||||| || || ||||| || ||| ||| || || |
Sbjct 356224 ATGCAAATCTTCGTCAAAACATTAACTGGTAAAACTATAACCCTTGAAGTAGAGCCATCT 356165
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | | |||| |||||| || || |||||| | || |||||||
Sbjct 356164 GATACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACCAGATCAA 356105
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
||| | ||||| ||||| || ||||| ||||||||| ||| | | ||||| |||
Sbjct 356104 CAACGTCTTATTTTTGCCGGGAAACAGTTGGAAGATGGACGAACCCTTTCAGATTATAAT 356045
Query 25215 ATTCAAAAGGAATCTAC 25231
||||| |||||||||||
Sbjct 356044 ATTCAGAAGGAATCTAC 356028
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
|||||||| ||| | || || | || || ||||| || || ||| ||||| ||
Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | || ||||||| || |||||||| | || ||||||
Sbjct 356620 GATACAATTGAGAATGTTAAAGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCAG 356561
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212
|| || | |||||||| || |||||| |||||||| || | || | ||||||| |
Sbjct 356560 CAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCT--CCGATTATA 356503
Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|||||||||| ||||| ||||| || |||| | |||| |||||||
Sbjct 356502 ATATTCAAAAAGAATCCACTCTCCATTTGGTACTCAGATTGAGAGGAGG 356454
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410776833735032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |