Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq169 192 4e-44 seq296 140 2e-28 >seq169 Length=813669 Score = 192 bits (212), Expect = 4e-44 Identities = 357/519 (69%), Gaps = 4/519 (1%) Strand=Plus/Plus Query 97122 ATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCC 97181 ||| || |||||| ||| | || | ||| || ||||| || || ||||| || || || Sbjct 304294 ATGAGCTATCATAACAGTCAGTAATGCATAACTGGCAATATTGAATGGCACTCCAAGACC 304353 Query 97182 CATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAAAACTG 97241 ||||||||||||||||||||| | |||||||| | ||||| ||| | ||||| Sbjct 304354 CATATCAGCTGATCTTTGATACAGTAAGCAGGAAAGTTCTCCATTTGCAACAAAGAACTG 304413 Query 97242 ACTCAATACA-TGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCAC 97300 | ||| || || || || || | |||||| || | || | ||||| |||| Sbjct 304414 -CACAAGGCAGTGGCAAGGAGGTAGAGCCATTAAAGGTATGTCAATAGGGTTCCAGGCAC 304472 Query 97301 ACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTA-ATTATCTGCTTTAAT 97359 |||| | || || | | | ||| || |||| || || || |||| | |||| | Sbjct 304473 ACATAATAATCCTACGA-CTGTTTGGATTGTCCTTAATGTCTTTTATTACATTATTTAGT 304531 Query 97360 TGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTGCTCCAAAATGC 97419 || |||| |||||| |||| || | | | ||| |||||| || ||||| || Sbjct 304532 TGGTCAATGCCTTCACCACTGTAGTCAGCATGCATTCCTCTATATTCAGCCCCAAAGTGT 304591 Query 97420 CTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGC 97479 ||||| ||||||||||| |||||||| | || |||||||| || || ||||| | Sbjct 304592 CTCCACTGGAATCCATAGACAGGTCCCAAATCGCCTTCTTCCCTTTCTTTAAAACCTAAA 304651 Query 97480 TTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGC 97539 ||||| | | | ||| | ||||| |||||||||||| ||| | |||| ||| Sbjct 304652 CCATCTAGAAACTCTCGAGAACTATTTGGATCCCAAATGTGAACATCTTTCTCTGCTAGC 304711 Query 97540 TCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAA 97599 ||||| | || || | |||||||||| |||||||| || || ||||||||| Sbjct 304712 TCTTTTGAATTTGTGCTACCCTTAATAAACCACAGTAATTCTTCAACCACTCCTCTCCAA 304771 Query 97600 AATACTCTCTTAGTTGTTAAGAGAGGAAAATCCTTTTCT 97638 ||||| || || ||||| | | ||||||| | |||||| Sbjct 304772 AATACCCTTTTTGTTGTAAGCAAAGGAAAAACGTTTTCT 304810 >seq296 Length=775295 Score = 140 bits (154), Expect = 2e-28 Identities = 327/488 (67%), Gaps = 4/488 (1%) Strand=Plus/Minus Query 97032 AAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTG 97091 |||||| ||| | | ||| || |||||||| | | |||||| || || | ||||| Sbjct 26000 AAGCTGGTCTTTCAAAGCTTCTATGTGATTTTGAAATATGTGACTGTCGCCAATCGTGTG 25941 Query 97092 AATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATA 97151 |||||||| | || |||| | || ||||| || ||||| |||| |||| || Sbjct 25940 TATAAATTCGCTGGGTTTTAAACCGGTCACATGAGCTATCATGACCGTTAGGAGAGCGTA 25881 Query 97152 GCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACA 97211 || |||||||| || || ||||| ||||||||||| || |||||||| |||||| | Sbjct 25880 ACTCGCAATGTTGAACGGTACCCCCAGTCCCATATCGGCCGATCTTTGGTATAACAACGA 25821 Query 97212 GGAAAGCTTTCCATCACACACATAAAACTG-ACTCAATACATGACAGGGGGGCAACGCCA 97270 || | | ||| | || |||| || || | | ||||||||| || | |||| Sbjct 25820 AGACAATTCGTCATTATTTACGAAAAATTGTACGAGACA-ATGACAGGGTGGAAGAGCCA 25762 Query 97271 TTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTG 97330 ||| ||| | || | |||||| | ||| | | || |||||||| | || | Sbjct 25761 TTTGTGGTATGTCCACAGGATTCCACGAACATAAGATTATCCTTCTATCATTCGGATAAT 25702 Query 97331 TGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCT 97390 | | || |||||||| | || | |||||||| | ||||| | |||||| ||| Sbjct 25701 TTTTGATTGTATTAATCACTTGACTCAATTGATCGATTCCTTCATTCGCGTAATTG-GCT 25643 Query 97391 -TAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGG 97449 | ||| ||| || ||||||||||| | ||| || || ||||| | || || | | Sbjct 25642 CGCATGCCTCTATACTCAGCTCCAAAATGACGCCACTGAAACCCATATATCGGACCCAAG 25583 Query 97450 TCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCA 97509 ||||| ||||||| || | || || | |||| ||||| ||| || | || || Sbjct 25582 TCTCCCTCTTCTCGGTCCCCAAACCCCATTCTATCCAAATACTCCCTCGAACTGTTGACA 25523 Query 97510 TCCCAAAT 97517 ||||| || Sbjct 25522 TCCCATAT 25515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346767144997160