Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq218 165 1e-35 seq25 149 9e-31 seq169 147 3e-30 seq428 145 1e-29 seq296 145 1e-29 >seq218 Length=661058 Score = 165 bits (182), Expect = 1e-35 Identities = 164/210 (78%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || || ||||| || ||| |||| ||||| || Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||||||| ||| ||||| || ||||||||||| |||||||| || ||||| ||||| Sbjct 356620 GATACAATTGAGAATGTTAAAGCA-AAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 356562 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | || ||||||||||||||| | || ||| |||| || | |||||||| Sbjct 356561 GCAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCTCCGATTATAA 356502 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT 124747 ||||||||||||||| ||| | |||||||| Sbjct 356501 TATTCAAAAAGAATCCACTCTCCATTTGGT 356472 Score = 159 bits (176), Expect = 5e-34 Identities = 178/238 (75%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | || ||| |||| || ||||||||||| | || | || || | Sbjct 356224 ATGCAAATCTTCGTCAAAACATTAACTGGTAAAACTATAACCCTTGAAGTAGAGCCATCT 356165 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| || | ||| ||||||||||| || |||||||| ||||| |||||| Sbjct 356164 GATACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACCAGATCAA 356105 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | ||||||||||| || ||||| || || ||| | ||||| | |||||||||| Sbjct 356104 CAACGTCTTATTTTTGCCGGGAAACAGTTGGAAGATGGACGAACCCTTTCAGATTATAAT 356045 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||||| || ||||| || || |||||||| || | | ||||||||||| ||| || Sbjct 356044 ATTCAGAAGGAATCTACATTACATTTGGTATTGAGGCTTCGAGGTGGTATGCAAATTT 355987 Score = 159 bits (176), Expect = 5e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| ||||||| || || || || || || ||| |||| |||| || Sbjct 356453 AATGCAGATCTTTGTAAAGACTCTTACTGGAAAGACCATCACTCTAGAAGTTGAGCCATC 356394 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||||||| || | ||| ||||||||||| || |||||||| || || || || Sbjct 356393 TGATACAATTGAAAACGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 356334 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||| | || |||||||| || || || ||||| ||| |||| || | || || || Sbjct 356333 ACAACGTCTAATTTTTGCTGGGAAGCAGTTAGAAGATGGTCGCACCCTTTCTGACTACAA 356274 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||||||||||| ||| ||||||| ||||| ||| | |||||||||| Sbjct 356273 TATTCAAAAAGAATCGACTCTGCATTTAGTTTTGCGTCTCAGAGGTGGTAT 356223 Score = 134 bits (148), Expect = 2e-26 Identities = 173/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||||||||| || ||||| || || | ||| | ||| | Sbjct 356909 AATGCAGATTTTTGTTAAGACACTAACTGGTAAAACAATCACCCTTGAGGTAGAACCGTC 356850 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| ||||| || |||| ||||||||||||||||| ||||| ||||| || || Sbjct 356849 TGACACAATAGAGAACGTAAAGGCTAAAATTCAAGATAAAGAGGGTATTCCACCAGACCA 356790 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | |||||||| || || || | || ||| || | ||||| ||||| || Sbjct 356789 ACAAAGATTAATTTTTGCTGGCAAGCAGCTTGAAGATGGTAGGACATTGTCTGATTACAA 356730 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || |||||||| || | ||||| ||||| ||| | |||| ||||| ||| || Sbjct 356729 CATCCAGAAAGAATCCACCCTTCATTTAGTTTTGCGTCTTAGAGGAGGTATGCAAATTT 356671 Score = 109 bits (120), Expect = 8e-19 Identities = 158/223 (71%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613 ||||||||||| || ||||| || || | || | ||| | || |||||| ||| Sbjct 357446 AAGACACTAACTGGTAAAACAATCACACTGGAAGTAGAACCGTCAGACACAATTGAAAAT 357387 Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673 | || || || || || ||||||||||| || || || |||||| | | |||||| Sbjct 357386 GTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAACAACGTTTGATTTTT 357327 Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733 || || || ||||| || ||| || ||||||| ||||| || ||||| ||||| Sbjct 357326 GCTGGTAAGCAATTGGAAGATGGTAGAACATTGTCTGATTACAACATTCAGAAAGAGAGT 357267 Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || | ||||||||||||||| | || || ||||| ||| || Sbjct 357266 ACCCTCCATTTGGTTTTACGTCTTCGTGGAGGTATGCAAATTT 357224 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || |||| || ||||| || || | || | ||| || Sbjct 352380 ATGCAAATTTTTGTTAAAACGTTAACTGGAAAAACCATCACACTGGAAGTAGAACCATCA 352321 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| || | || || || || || ||||||||||| || || || || Sbjct 352320 GACACAATTGAAAACGTGAAGGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 352261 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | |||||||| || |||||||| || ||| || |||| || ||||| || Sbjct 352260 CAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 352201 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| || | ||||||||||||||| | ||||||| || Sbjct 352200 ATTCAGAAAGAGAGTACCCTCCATTTGGTTTTACGTCTTAGAGGTGGAAT 352151 >seq25 Length=1883024 Score = 149 bits (164), Expect = 9e-31 Identities = 172/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || ||||| || || | ||| ||||| | Sbjct 1512251 ATGCAAATTTTTGTGAAAACTCTTACCGGAAAAACAATCACCCTTGAGGTTGAACCCTCA 1512192 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| ||| |||| ||| |||||||| || |||||||| || ||||||||| Sbjct 1512191 GACACAATCGAAAATGTAAAGGCGAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 1512132 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | ||||| || || || |||||||| ||| | || || | || ||||| Sbjct 1512131 CAGAGGTTAATTTTCGCTGGTAAGCAATTAGAAGATGGCCGTACTCTTTCTGACTATAAC 1512072 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 ||||| |||||||| || || || ||||| ||||||||| |||| ||||||| Sbjct 1512071 ATTCAGAAAGAATCGACCTTACACTTGGTGTTACGTTTAAGAGGAGGTATTA 1512020 >seq169 Length=813669 Score = 147 bits (162), Expect = 3e-30 Identities = 351/527 (67%), Gaps = 9/527 (2%) Strand=Plus/Plus Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAAT 205494 || || || |||| ||| || |||||| ||||| ||| |||||| |||| ||| ||| Sbjct 304280 TTCAACTTTGTTATATGAGCTATCATAACAGTCAGTAATGCATAACTGGCAATATTGAAT 304339 Query 205495 GGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTA 205554 || || || | |||||||||||||||||||||||||| | || | ||| | | ||| Sbjct 304340 GGCACTCCAAGACCCATATCAGCTGATCTTTGATACAGTAAGCAGGAAAGTTCTCCATTT 304399 Query 205555 TTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCT 205614 | ||| || || |||| || || ||||| |||| | |||| | || Sbjct 304400 GCA---ACAAAGAACTGCACAAGGCAGTGGCAAGGAGGTAGAGCCATTAAAGGTATGTCA 304456 Query 205615 ATAGGATTCCAGGCTGTTAATATTATATTTCTA-GA--TTCAGGtttattttttatttta 205671 ||||| |||||||| | || ||| | ||| || | || || | || || | Sbjct 304457 ATAGGGTTCCAGGC---ACACATAATAATCCTACGACTGTTTGGATTGTCCTTAATGTCT 304513 Query 205672 tttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATA 205731 ||||| | || ||| ||| |||| |||| | | || | | || ||| | || Sbjct 304514 TTTATTACATTATTTAGTTGGTCAATGCCTTCACCACTGTAGTCAGCATGCATTCCTCTA 304573 Query 205732 TATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTT 205791 |||| ||| ||||| || | ||| || || ||||| || || || ||||| ||||||| Sbjct 304574 TATTCAGCCCCAAAGTGTCTCCACTGGAATCCATAGACAGGTCCCAAATCGCCTTCTTCC 304633 Query 205792 CTATCATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatgg 205851 || || |||||||| | || | | | | || | |||| ||||||||| || Sbjct 304634 CTTTCTTTAAAACCTAAACCATCTAGAAACTCTCGAGAACTATTTGGATCCCAAATGTGA 304693 Query 205852 attcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCT 205911 | |||| | | ||| |||| ||| || || |||||||| | ||||||| Sbjct 304694 ACATCTTTCTCTGCTAGCTCTTTTGAATTTGTGCTACCCTTAATAAACCACAGTAATTCT 304753 Query 205912 TCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAA 205958 ||||| | |||||||||||| | ||||||||||| || ||||| Sbjct 304754 TCAACCACTCCTCTCCAAAATACCCTTTTTGTTGTAAGCAAAGGAAA 304800 >seq428 Length=160056 Score = 145 bits (160), Expect = 1e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||||||||| | ||||| |||| || || || || ||| ||||| | ||| | Sbjct 129444 ATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTCC 129503 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| | || ||||| |||||||||||||| || |||||||| ||| Sbjct 129504 GATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCAA 129563 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | || |||||||| ||||||||||| || ||| | || || || ||||| || Sbjct 129564 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAAC 129623 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTA 124751 || ||||| ||||| || ||||||||||| ||| Sbjct 129624 ATCCAAAAGGAATCGACATTGCATTTGGTCTTA 129656 >seq296 Length=775295 Score = 145 bits (160), Expect = 1e-29 Identities = 267/387 (69%), Gaps = 7/387 (2%) Strand=Plus/Minus Query 205408 CCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTC 205467 ||||| | || |||||||| ||||||||| || | ||| || ||||| || Sbjct 25951 CCAATCGTGTGTATAAATTCGCTGGGTTTTAAACCGGTCACATGAGCTATCATGACCGTT 25892 Query 205468 AATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGA 205527 | | | ||||| |||| || || ||||| || | |||||||| || |||||||| Sbjct 25891 AGGAGAGCGTAACTCGCAATGTTGAACGGTACCCCCAGTCCCATATCGGCCGATCTTTGG 25832 Query 205528 TACATTTGACATGTAAGATATTTATT-ATTAATTACATGAAATTGTACAAAACAATGACA 205586 || | ||| |||| | || | |||| |||| ||||||||| | ||||||||| Sbjct 25831 TATA----ACAACGAAGACAATTCGTCATTATTTACGAAAAATTGTACGAGACAATGACA 25776 Query 205587 AGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCT 205646 ||||| | | |||| | | | || | ||||||||| | ||| ||||| |||| Sbjct 25775 GGGTGGAAGAGCCATTTGTGGTATGTCCACAGGATTCCACGAACATAAGATTATCCTTCT 25716 Query 205647 AG-ATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGAT 205705 | |||| || | |||||| ||| |||| || | || | |||||||| | ||||| || Sbjct 25715 ATCATTC-GGATAATTTTTGATTGTATTAATCACTTGACTCAATTGATCGATTCCTTCAT 25657 Query 205706 TTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCAT 205765 | | ||||| | ||| | |||| | ||| |||||||||||||| ||||| |||| Sbjct 25656 TCGCGTAATTGGCTCGCATGCCTCTATACTCAGCTCCAAAATGACGCCACTGAAACCCAT 25597 Query 205766 AAACTGGACCTAAATCACCTTCTTTTC 205792 | | ||||| || || || |||| || Sbjct 25596 ATATCGGACCCAAGTCTCCCTCTTCTC 25570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755418340518400