Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq218 165 1e-35
seq25 149 9e-31
seq169 147 3e-30
seq428 145 1e-29
seq296 145 1e-29
>seq218
Length=661058
Score = 165 bits (182), Expect = 1e-35
Identities = 164/210 (78%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| || || || ||||| || ||| |||| ||||| ||
Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621
Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||||||||| ||| ||||| || ||||||||||| |||||||| || ||||| |||||
Sbjct 356620 GATACAATTGAGAATGTTAAAGCA-AAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 356562
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| ||| | || ||||||||||||||| | || ||| |||| || | ||||||||
Sbjct 356561 GCAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCTCCGATTATAA 356502
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGT 124747
||||||||||||||| ||| | ||||||||
Sbjct 356501 TATTCAAAAAGAATCCACTCTCCATTTGGT 356472
Score = 159 bits (176), Expect = 5e-34
Identities = 178/238 (75%), Gaps = 0/238 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | || ||| |||| || ||||||||||| | || | || || |
Sbjct 356224 ATGCAAATCTTCGTCAAAACATTAACTGGTAAAACTATAACCCTTGAAGTAGAGCCATCT 356165
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|||||||| || | ||| ||||||||||| || |||||||| ||||| ||||||
Sbjct 356164 GATACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACCAGATCAA 356105
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | ||||||||||| || ||||| || || ||| | ||||| | ||||||||||
Sbjct 356104 CAACGTCTTATTTTTGCCGGGAAACAGTTGGAAGATGGACGAACCCTTTCAGATTATAAT 356045
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
||||| || ||||| || || |||||||| || | | ||||||||||| ||| ||
Sbjct 356044 ATTCAGAAGGAATCTACATTACATTTGGTATTGAGGCTTCGAGGTGGTATGCAAATTT 355987
Score = 159 bits (176), Expect = 5e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || ||| ||||||| || || || || || || ||| |||| |||| ||
Sbjct 356453 AATGCAGATCTTTGTAAAGACTCTTACTGGAAAGACCATCACTCTAGAAGTTGAGCCATC 356394
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||||||||| || | ||| ||||||||||| || |||||||| || || || ||
Sbjct 356393 TGATACAATTGAAAACGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCA 356334
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | || |||||||| || || || ||||| ||| |||| || | || || ||
Sbjct 356333 ACAACGTCTAATTTTTGCTGGGAAGCAGTTAGAAGATGGTCGCACCCTTTCTGACTACAA 356274
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||||||||||||| ||| ||||||| ||||| ||| | ||||||||||
Sbjct 356273 TATTCAAAAAGAATCGACTCTGCATTTAGTTTTGCGTCTCAGAGGTGGTAT 356223
Score = 134 bits (148), Expect = 2e-26
Identities = 173/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || ||| | ||||||||||| || ||||| || || | ||| | ||| |
Sbjct 356909 AATGCAGATTTTTGTTAAGACACTAACTGGTAAAACAATCACCCTTGAGGTAGAACCGTC 356850
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| ||||| || |||| ||||||||||||||||| ||||| ||||| || ||
Sbjct 356849 TGACACAATAGAGAACGTAAAGGCTAAAATTCAAGATAAAGAGGGTATTCCACCAGACCA 356790
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||| | |||||||| || || || | || ||| || | ||||| ||||| ||
Sbjct 356789 ACAAAGATTAATTTTTGCTGGCAAGCAGCTTGAAGATGGTAGGACATTGTCTGATTACAA 356730
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| || |||||||| || | ||||| ||||| ||| | |||| ||||| ||| ||
Sbjct 356729 CATCCAGAAAGAATCCACCCTTCATTTAGTTTTGCGTCTTAGAGGAGGTATGCAAATTT 356671
Score = 109 bits (120), Expect = 8e-19
Identities = 158/223 (71%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 124554 AAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAATGATACAATTTCTAAT 124613
||||||||||| || ||||| || || | || | ||| | || |||||| |||
Sbjct 357446 AAGACACTAACTGGTAAAACAATCACACTGGAAGTAGAACCGTCAGACACAATTGAAAAT 357387
Query 124614 TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTT 124673
| || || || || || ||||||||||| || || || |||||| | | ||||||
Sbjct 357386 GTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAACAACGTTTGATTTTT 357327
Query 124674 GCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCA 124733
|| || || ||||| || ||| || ||||||| ||||| || ||||| |||||
Sbjct 357326 GCTGGTAAGCAATTGGAAGATGGTAGAACATTGTCTGATTACAACATTCAGAAAGAGAGT 357267
Query 124734 ACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|| | ||||||||||||||| | || || ||||| ||| ||
Sbjct 357266 ACCCTCCATTTGGTTTTACGTCTTCGTGGAGGTATGCAAATTT 357224
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | || || |||| || ||||| || || | || | ||| ||
Sbjct 352380 ATGCAAATTTTTGTTAAAACGTTAACTGGAAAAACCATCACACTGGAAGTAGAACCATCA 352321
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| |||||| || | || || || || || ||||||||||| || || || ||
Sbjct 352320 GACACAATTGAAAACGTGAAGGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 352261
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | |||||||| || |||||||| || ||| || |||| || ||||| ||
Sbjct 352260 CAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 352201
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| ||||| || | ||||||||||||||| | ||||||| ||
Sbjct 352200 ATTCAGAAAGAGAGTACCCTCCATTTGGTTTTACGTCTTAGAGGTGGAAT 352151
>seq25
Length=1883024
Score = 149 bits (164), Expect = 9e-31
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | || || || || || ||||| || || | ||| ||||| |
Sbjct 1512251 ATGCAAATTTTTGTGAAAACTCTTACCGGAAAAACAATCACCCTTGAGGTTGAACCCTCA 1512192
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| ||||| ||| |||| ||| |||||||| || |||||||| || |||||||||
Sbjct 1512191 GACACAATCGAAAATGTAAAGGCGAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 1512132
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| ||| | ||||| || || || |||||||| ||| | || || | || |||||
Sbjct 1512131 CAGAGGTTAATTTTCGCTGGTAAGCAATTAGAAGATGGCCGTACTCTTTCTGACTATAAC 1512072
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
||||| |||||||| || || || ||||| ||||||||| |||| |||||||
Sbjct 1512071 ATTCAGAAAGAATCGACCTTACACTTGGTGTTACGTTTAAGAGGAGGTATTA 1512020
>seq169
Length=813669
Score = 147 bits (162), Expect = 3e-30
Identities = 351/527 (67%), Gaps = 9/527 (2%)
Strand=Plus/Plus
Query 205435 TTTAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAAT 205494
|| || || |||| ||| || |||||| ||||| ||| |||||| |||| ||| |||
Sbjct 304280 TTCAACTTTGTTATATGAGCTATCATAACAGTCAGTAATGCATAACTGGCAATATTGAAT 304339
Query 205495 GGTACACCTAAACCCATATCAGCTGATCTTTGATACATTTGACATGTAAGATATTTATTA 205554
|| || || | |||||||||||||||||||||||||| | || | ||| | | |||
Sbjct 304340 GGCACTCCAAGACCCATATCAGCTGATCTTTGATACAGTAAGCAGGAAAGTTCTCCATTT 304399
Query 205555 TTAATTACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCT 205614
| ||| || || |||| || || ||||| |||| | |||| | ||
Sbjct 304400 GCA---ACAAAGAACTGCACAAGGCAGTGGCAAGGAGGTAGAGCCATTAAAGGTATGTCA 304456
Query 205615 ATAGGATTCCAGGCTGTTAATATTATATTTCTA-GA--TTCAGGtttattttttatttta 205671
||||| |||||||| | || ||| | ||| || | || || | || || |
Sbjct 304457 ATAGGGTTCCAGGC---ACACATAATAATCCTACGACTGTTTGGATTGTCCTTAATGTCT 304513
Query 205672 tttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATA 205731
||||| | || ||| ||| |||| |||| | | || | | || ||| | ||
Sbjct 304514 TTTATTACATTATTTAGTTGGTCAATGCCTTCACCACTGTAGTCAGCATGCATTCCTCTA 304573
Query 205732 TATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTT 205791
|||| ||| ||||| || | ||| || || ||||| || || || ||||| |||||||
Sbjct 304574 TATTCAGCCCCAAAGTGTCTCCACTGGAATCCATAGACAGGTCCCAAATCGCCTTCTTCC 304633
Query 205792 CTATCATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatgg 205851
|| || |||||||| | || | | | | || | |||| ||||||||| ||
Sbjct 304634 CTTTCTTTAAAACCTAAACCATCTAGAAACTCTCGAGAACTATTTGGATCCCAAATGTGA 304693
Query 205852 attcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATAATAATTCT 205911
| |||| | | ||| |||| ||| || || |||||||| | |||||||
Sbjct 304694 ACATCTTTCTCTGCTAGCTCTTTTGAATTTGTGCTACCCTTAATAAACCACAGTAATTCT 304753
Query 205912 TCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAA 205958
||||| | |||||||||||| | ||||||||||| || |||||
Sbjct 304754 TCAACCACTCCTCTCCAAAATACCCTTTTTGTTGTAAGCAAAGGAAA 304800
>seq428
Length=160056
Score = 145 bits (160), Expect = 1e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||||||||| | ||||| |||| || || || || ||| ||||| | ||| |
Sbjct 129444 ATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTCC 129503
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|||||||| ||| | || ||||| |||||||||||||| || |||||||| |||
Sbjct 129504 GATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCAA 129563
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | || |||||||| ||||||||||| || ||| | || || || ||||| ||
Sbjct 129564 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAAC 129623
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTA 124751
|| ||||| ||||| || ||||||||||| |||
Sbjct 129624 ATCCAAAAGGAATCGACATTGCATTTGGTCTTA 129656
>seq296
Length=775295
Score = 145 bits (160), Expect = 1e-29
Identities = 267/387 (69%), Gaps = 7/387 (2%)
Strand=Plus/Minus
Query 205408 CCAATATTATGAATAAATTCATATGGTTTTAAATTAGTTAAATGTGCAATCATATAAGTC 205467
||||| | || |||||||| ||||||||| || | ||| || ||||| ||
Sbjct 25951 CCAATCGTGTGTATAAATTCGCTGGGTTTTAAACCGGTCACATGAGCTATCATGACCGTT 25892
Query 205468 AATAAACTATAACTAGCAACATTAAATGGTACACCTAAACCCATATCAGCTGATCTTTGA 205527
| | | ||||| |||| || || ||||| || | |||||||| || ||||||||
Sbjct 25891 AGGAGAGCGTAACTCGCAATGTTGAACGGTACCCCCAGTCCCATATCGGCCGATCTTTGG 25832
Query 205528 TACATTTGACATGTAAGATATTTATT-ATTAATTACATGAAATTGTACAAAACAATGACA 205586
|| | ||| |||| | || | |||| |||| ||||||||| | |||||||||
Sbjct 25831 TATA----ACAACGAAGACAATTCGTCATTATTTACGAAAAATTGTACGAGACAATGACA 25776
Query 205587 AGGTGGTATAACCATATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCT 205646
||||| | | |||| | | | || | ||||||||| | ||| ||||| ||||
Sbjct 25775 GGGTGGAAGAGCCATTTGTGGTATGTCCACAGGATTCCACGAACATAAGATTATCCTTCT 25716
Query 205647 AG-ATTCAGGtttattttttattttatttatAATATGTGTTAATTGATCAAATCCTTGAT 205705
| |||| || | |||||| ||| |||| || | || | |||||||| | ||||| ||
Sbjct 25715 ATCATTC-GGATAATTTTTGATTGTATTAATCACTTGACTCAATTGATCGATTCCTTCAT 25657
Query 205706 TTGTATAATTTGTATCCATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCAT 205765
| | ||||| | ||| | |||| | ||| |||||||||||||| ||||| ||||
Sbjct 25656 TCGCGTAATTGGCTCGCATGCCTCTATACTCAGCTCCAAAATGACGCCACTGAAACCCAT 25597
Query 205766 AAACTGGACCTAAATCACCTTCTTTTC 205792
| | ||||| || || || |||| ||
Sbjct 25596 ATATCGGACCCAAGTCTCCCTCTTCTC 25570
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755418340518400
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