Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq25 118 9e-22 seq218 102 7e-17 seq428 87.8 2e-12 >seq25 Length=1883024 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| | ||| | ||||||||||| | || || ||||| |||||||| || || Sbjct 1512023 TACCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAG 1512082 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | || || |||||| | || | | ||| ||||| |||| Sbjct 1512083 AAAGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAG 1512142 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || ||||||||| ||| || || || | ||||| ||||| | | || | Sbjct 1512143 GAATACCTTCCTTGTCTTGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAA 1512202 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 |||| | ||| | ||||| ||||| |||||||| |||||||| |||||| Sbjct 1512203 CCTCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCATG 1512252 >seq218 Length=661058 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | ||||| | ||||| |||| || || ||||||||||| || |||||| Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || ||| || || |||||||| || |||| | | ||||||||| || || Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGAC 118690 ||||| || |||||| ||||||| |||||| | || | || || | || | || || Sbjct 356574 ATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGT-TCAAC 356632 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | |||||| || || || || || || ||||| ||||| Sbjct 356633 TTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| || || || | || || ||||||||||| ||||| || | ||||| ||| Sbjct 356240 CAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATC 356299 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || | ||| || ||||| | || ||||| || || || ||||| || || |||||||| Sbjct 356300 TTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTC 356359 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | |||||| |||||| | ||| | || || | ||| || || | || | || Sbjct 356360 TTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGT 356419 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || ||||| |||||||| |||||||| Sbjct 356420 CTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452 >seq428 Length=160056 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 |||||| | ||||| || ||||| || | ||| || || ||||| ||||||||||| Sbjct 129671 ACCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGA 129612 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| || ||| || | ||||||||||| | || ||||| || || || || || Sbjct 129611 CAAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGG 129552 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || || || ||| |||||| || || | ||||| || || | ||||| Sbjct 129551 AATTCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGAC 129492 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| | || | || || || || | ||| || || || || ||||| Sbjct 129491 CTCTAAAGTGATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433809314215696