Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq218 129 9e-25
seq137 122 1e-22
seq428 111 2e-19
seq135 105 1e-17
seq209 98.7 1e-15
seq316 95.1 2e-14
>seq218
Length=661058
Score = 129 bits (142), Expect = 9e-25
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
||||||||||||| | ||| |||||||| | ||| ||||| || || ||||| |
Sbjct 352152 TTCCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAG 352211
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| | |||||| | ||| || |||||||| || ||||||||||| | |||||| || ||||
Sbjct 352212 ACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAG 352271
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| |||||||| || || || ||||| |||||
Sbjct 352272 GAATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTA 352331
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| |||||||| ||||| || ||||| ||||||| || ||||||||
Sbjct 352332 CTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 129 bits (142), Expect = 9e-25
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
||||||| ||| || |||||||||||||| |||||||| || |||||||||||||||
Sbjct 355998 CCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAA 356057
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| |||| | ||| || || ||||| || |||||||| | | ||| ||||| || ||
Sbjct 356058 AGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGG 356117
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||||| || ||||||
Sbjct 356118 ATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACT 356177
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|| || || || |||||||| ||||||||||| | ||| ||||||||
Sbjct 356178 TCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 114 bits (126), Expect = 2e-20
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108
|||| ||||| | ||| | ||||||||| | ||| |||||||| ||||||||||| |
Sbjct 356452 TTCCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGG 356511
Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168
| || || | | ||| || | ||||||||| ||||| || || || |||||||| || |
Sbjct 356512 AGAGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTG 356571
Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228
|||| |||||||| ||||| |||||||| ||| |
Sbjct 356572 GAATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAA 356631
Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||||| ||||| |||||||| || | || || | ||| ||||||||
Sbjct 356632 CTTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 96.9 bits (106), Expect = 5e-15
Identities = 145/214 (68%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| || | ||| | ||| |||||||| | ||| ||||| || || ||||| ||
Sbjct 357235 CCTCCACGAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 357294
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | ||| || ||||| || |||||||||||||| | ||| || || ||||||
Sbjct 357295 AATGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGA 357354
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| |||||||| || || || ||||| |||||||
Sbjct 357355 ATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTACT 357414
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAA 146264
|| ||||||||||||||||| |||| ||| ||||
Sbjct 357415 TCCAGTGTGATTGTTTTACCAGTTAGTGTCTTAA 357448
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/228 (67%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| |||||||| | || || ||||| | || |||||||| || || ||||| ||
Sbjct 356682 CCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 356741
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| || || | ||| || | || || ||||||||||| |||||||| || || || |||
Sbjct 356742 AATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGA 356801
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| || ||||||||||| || || || ||||||
Sbjct 356802 ATACCCTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTACC 356861
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
|| || |||||||||||||| |||| ||| |||| || || ||||||
Sbjct 356862 TCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCATT 356909
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| || | || || ||||| | ||| |||||||| ||||| || || |||
Sbjct 356226 CCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAA 356285
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| || | | ||| ||||| || || ||||||||||| | | ||| || || ||||||
Sbjct 356286 AGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGA 356345
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 356346 ATACCTTCCTTGTCTTG 356362
>seq137
Length=480032
Score = 122 bits (134), Expect = 1e-22
Identities = 173/238 (73%), Gaps = 8/238 (3%)
Strand=Plus/Plus
Query 10455 GCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGAC 10514
||||| |||||| |||| |||| | | ||| || | ||||| || || ||||||
Sbjct 193030 GCTCCACGATCTGGACTAGCCGTAAAGCATTCTATAGACGTAGGAGCAGGTGTTATTGAC 193089
Query 10515 GAAGATTATAGAGGA--AATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTA 10572
||||| || ||||| ||| || || ||||||||||| |||| ||| |||| |||
Sbjct 193090 GAAGACTACAGAGGTGTAATTAAGG--TACTATTATTTAATTATTCCAATAAAGAATTTG 193147
Query 10573 TAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAAATTTTATATCCTA-AA 10631
||||| | | ||| ||||||||| |||| ||||| ||||||||||| | |||||| | ||
Sbjct 193148 TAATAGAGATAGGTGATAGAATAGCTCAGTTAATTTGTGAAAAAATATCATATCCAACAA 193207
Query 10632 ATGTTAAAAG-TCGATAGTTTATCAGAAACAAAAAGATCTGATTTTGGTTTTGGATCT 10688
|||| || | ||| || ||| | ||| | | || ||| ||| |||||||||
Sbjct 193208 CTGTTGAATGTTCGTTA--TTAGATAATACATATAAGTCAAATTGTGGATTTGGATCT 193263
>seq428
Length=160056
Score = 111 bits (122), Expect = 2e-19
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|| || || | |||||| |||||||| || || ||||| || || || ||||| ||
Sbjct 129670 CCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGAC 129611
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||| | || ||| || |||||||||||||||||||| | | ||| || || || |||
Sbjct 129610 AAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGA 129551
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
||||||||||||||||| ||||| || ||| ||
Sbjct 129550 ATTCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACC 129491
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| ||||| || ||||| ||||| || || | ||||||||||||
Sbjct 129490 TCTAAAGTGATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444
>seq135
Length=992699
Score = 105 bits (116), Expect = 1e-17
Identities = 133/181 (73%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 10455 GCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGAC 10514
||||| ||||| | |||| ||| | | ||| || | ||||| | || ||||||
Sbjct 566867 GCTCCATGATCTCAACTAGCCGCCAATCATTCTATAGACGTAGGAGCAGATGTTATTGAC 566808
Query 10515 GAAGATTATAGAGGA--AATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTA 10572
||||| || ||||| ||| || || ||||||||||| |||||||| |||| |||
Sbjct 566807 GAAGACTACAGAGGTGTAATTAAGG--TACTATTATTTAATTATTCTAATAAAGAATTTG 566750
Query 10573 TAATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAAATTTTATATCCTAAAA 10632
|| || | | ||| ||||||||| |||| |||| ||||||||||| | |||||| | ||
Sbjct 566749 TACTAGAGATAGGTGATAGAATAGCTCAGTTAAATTGTGAAAAAATATCATATCCAACAA 566690
Query 10633 T 10633
|
Sbjct 566689 T 566689
>seq209
Length=720108
Score = 98.7 bits (108), Expect = 1e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 10455 GCTCCCAGATCTGATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGAC 10514
||||| |||||| |||| | || | | || || || ||||| || || ||| ||
Sbjct 33535 GCTCCACGATCTGGACTAGCCGTCGATCATTCTAAAGACATAGGAGCAGGTGTTATTAAC 33594
Query 10515 GAAGATTATAGAGGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTATA 10574
||||| || |||||| | ||| |||| || ||| ||||||| |||| ||| ||
Sbjct 33595 GAAGACTACAGAGGAGTAATTAACGTACTATTGTTGAATTATTCTAACAAAGAATTTGTA 33654
Query 10575 ATAAATAGAGGAGATAGAATATCTCAATTAATATGTGAAAAAATTTTATATCCTAAAAT 10633
||| | | ||| |||||||| |||| ||||| ||||||||||| | |||||| | |||
Sbjct 33655 ATAGAGATAGGTAATAGAATAGCTCAGTTAATTTGTGAAAAAATATCATATCCAACAAT 33713
>seq316
Length=279878
Score = 95.1 bits (104), Expect = 2e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 10491 GATATTGGAGCTGGAGTAATTGACGAAGATTATAGAGGAAATGTGGGAGTAATATTATTT 10550
|| || ||||| || || ||| ||||||| || ||||| || ||| ||| ||
Sbjct 150929 GACATAGGAGCAGGTGTTATTAACGAAGACTACAGAGGTGTAGTTAACGTACCATTGTTG 150988
Query 10551 AATCATTCTAATGAAGATTTTATAATAAATAGAGGAGATAGAATATCTCAATTAATATGT 10610
||| ||||||| |||| ||| ||||| | | ||| ||||||| |||| ||||| |||
Sbjct 150989 AATTATTCTAACAAAGAATTTGTAATAGAGATAGGTAATAGAATGGCTCAGTTAATTTGT 151048
Query 10611 GAAAAAATTTTATATCCTA-AAATGTTAAAAGTCGATAGTTTATCAGAAACAAAAAGATC 10669
|||||||| | |||||| | || |||| || || || |||| | ||||| || ||
Sbjct 151049 GAAAAAATATCATATCCAACAATTGTTCAATGTTCAT-CTTTAGATAATACAAATAGGTC 151107
Query 10670 TGATTTTGGTTTTGGATCT 10688
||| ||| |||| ||||
Sbjct 151108 AAATTGTGGATTTGTATCT 151126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743489335208960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |