Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq218 89.7 4e-13
>seq218
Length=661058
Score = 89.7 bits (98), Expect = 4e-13
Identities = 103/137 (75%), Gaps = 4/137 (3%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|||||||| | | ||| ||||| || || || ||||| |||||||||||||| || |
Sbjct 352154 CCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 352213
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | | || |||| |||||| ||||| || ||||| || || ||||| ||||
Sbjct 352214 AAAGTT--CTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAG 352271
Query 45228 GCACACCCTCCTTGTCC 45244
| | ||| || ||||||
Sbjct 352272 GAATACCTTCTTTGTCC 352288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395055997863748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |