Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq218 89.7 4e-13 >seq218 Length=661058 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/137 (75%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 |||||||| | | ||| ||||| || || || ||||| |||||||||||||| || | Sbjct 352154 CCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 352213 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | | || |||| |||||| ||||| || ||||| || || ||||| |||| Sbjct 352214 AAAGTT--CTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAG 352271 Query 45228 GCACACCCTCCTTGTCC 45244 | | ||| || |||||| Sbjct 352272 GAATACCTTCTTTGTCC 352288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395055997863748