Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq12 333 3e-86 >seq12 Length=2314596 Score = 333 bits (368), Expect = 3e-86 Identities = 641/932 (69%), Gaps = 24/932 (3%) Strand=Plus/Minus Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957 ||| | || || || ||||||||||||| ||| | ||||||||||| || || || || Sbjct 282102 GAAGTGACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCA 282043 Query 13958 TCCAGTG-ATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACT-TTATCAC 14015 || |||| | || || | |||||| ||||| ||||| || |||| | | | ||||||| Sbjct 282042 TC-AGTGGAAATTTTGTTCATAAAGTCAAACGGATTC-TTAACATTATAAATCTTATCAC 281985 Query 14016 AACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCAC 14075 |||| | |||| || | | || || | || || ||||| |||||||| | | | Sbjct 281984 AACCCAACTCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGC 281925 Query 14076 AATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACA 14135 |||||||||| ||||| ||||||| | || ||||||||||| | ||| || | Sbjct 281924 AATTCATACCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAA 281865 Query 14136 CAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAA 14195 | || ||| || ||| || | || || || || | ||| | | ||| Sbjct 281864 CTGCATCGCGAATTATATCTGTTACTCGCTCTTTTGATGG----TTTTTGAACAATATAA 281809 Query 14196 AAA----TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTT 14251 || ||||||| |||||||||||||| | || ||||| | | |||||| || || Sbjct 281808 GAAAACATTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTA 281749 Query 14252 GAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT 14311 |||||||| | ||||||||| | || ||||| || | |||||| || ||||| || | Sbjct 281748 GAAAATGTCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTT 281689 Query 14312 CCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCT 14371 || |||||||| ||||| || || || ||||| || | | ||||||| || | ||| Sbjct 281688 CCTGAAAAGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCA 281629 Query 14372 TTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT 14431 || || | ||||| | |||||| |||| || || |||| | || ||| ||| Sbjct 281628 TTCTTACTGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTT 281569 Query 14432 TCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTAT--GTATCAATAA 14489 ||||||||||| || | | ||| ||||||| | | |||| ||| || ||||| | Sbjct 281568 TCAATAGCATTGAAAAGAAATTCTTTCTCTT--CTGGGTCAAATATATAAGTGTCAATGA 281511 Query 14490 GTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATC 14549 | ||||||||||| || || || ||||| || || || || ||||||||||| || | Sbjct 281510 GAGTACTATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAAC 281451 Query 14550 TAGCTTCTGACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATA 14608 ||| || | |||||| || ||| | ||||| || | | |||||||| || || Sbjct 281450 GAGCCTCAGTTACTTGTACTTCTTGACT-GAATCTCTCTACAAGGTTTTCATTTACAATT 281392 Query 14609 CCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG 14668 |||||| || |||||||| || | || | | ||| || | || ||||| Sbjct 281391 CCATCAGATGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGAC 281332 Query 14669 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14728 | || | ||| | ||| | ||||||||||| |||||||| || |||||| || | Sbjct 281331 AACTTATCCCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAA 281272 Query 14729 GCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA- 14787 || |||||| || ||| || |||| || ||| |||| |||||||| | ||| || Sbjct 281271 GCTTCAGCTTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAAC 281212 Query 14788 --TCTTGAAGATGTTTCTTTAAGAATTGGTTC 14817 ||||| ||| ||||| |||| | |||||| Sbjct 281211 CTTCTTG--GAT-TTTCTCTAAGCAATGGTTC 281183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482321555071840