Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq12 333 3e-86
>seq12
Length=2314596
Score = 333 bits (368), Expect = 3e-86
Identities = 641/932 (69%), Gaps = 24/932 (3%)
Strand=Plus/Minus
Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957
||| | || || || ||||||||||||| ||| | ||||||||||| || || || ||
Sbjct 282102 GAAGTGACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCA 282043
Query 13958 TCCAGTG-ATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACT-TTATCAC 14015
|| |||| | || || | |||||| ||||| ||||| || |||| | | | |||||||
Sbjct 282042 TC-AGTGGAAATTTTGTTCATAAAGTCAAACGGATTC-TTAACATTATAAATCTTATCAC 281985
Query 14016 AACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCAC 14075
|||| | |||| || | | || || | || || ||||| |||||||| | | |
Sbjct 281984 AACCCAACTCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGC 281925
Query 14076 AATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACA 14135
|||||||||| ||||| ||||||| | || ||||||||||| | ||| || |
Sbjct 281924 AATTCATACCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAA 281865
Query 14136 CAGCCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATTTTAGATGTTTAA 14195
| || ||| || ||| || | || || || || | ||| | | |||
Sbjct 281864 CTGCATCGCGAATTATATCTGTTACTCGCTCTTTTGATGG----TTTTTGAACAATATAA 281809
Query 14196 AAA----TTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTT 14251
|| ||||||| |||||||||||||| | || ||||| | | |||||| || ||
Sbjct 281808 GAAAACATTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTA 281749
Query 14252 GAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGAT 14311
|||||||| | ||||||||| | || ||||| || | |||||| || ||||| || |
Sbjct 281748 GAAAATGTCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTT 281689
Query 14312 CCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCT 14371
|| |||||||| ||||| || || || ||||| || | | ||||||| || | |||
Sbjct 281688 CCTGAAAAGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCA 281629
Query 14372 TTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTT 14431
|| || | ||||| | |||||| |||| || || |||| | || ||| |||
Sbjct 281628 TTCTTACTGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTT 281569
Query 14432 TCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTAT--GTATCAATAA 14489
||||||||||| || | | ||| ||||||| | | |||| ||| || ||||| |
Sbjct 281568 TCAATAGCATTGAAAAGAAATTCTTTCTCTT--CTGGGTCAAATATATAAGTGTCAATGA 281511
Query 14490 GTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATC 14549
| ||||||||||| || || || ||||| || || || || ||||||||||| || |
Sbjct 281510 GAGTACTATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAAC 281451
Query 14550 TAGCTTCTGACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATA 14608
||| || | |||||| || ||| | ||||| || | | |||||||| || ||
Sbjct 281450 GAGCCTCAGTTACTTGTACTTCTTGACT-GAATCTCTCTACAAGGTTTTCATTTACAATT 281392
Query 14609 CCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTG 14668
|||||| || |||||||| || | || | | ||| || | || |||||
Sbjct 281391 CCATCAGATGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGAC 281332
Query 14669 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14728
| || | ||| | ||| | ||||||||||| |||||||| || |||||| || |
Sbjct 281331 AACTTATCCCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAA 281272
Query 14729 GCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA- 14787
|| |||||| || ||| || |||| || ||| |||| |||||||| | ||| ||
Sbjct 281271 GCTTCAGCTTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAAC 281212
Query 14788 --TCTTGAAGATGTTTCTTTAAGAATTGGTTC 14817
||||| ||| ||||| |||| | ||||||
Sbjct 281211 CTTCTTG--GAT-TTTCTCTAAGCAATGGTTC 281183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482321555071840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |