Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq169 152 1e-31
>seq169
Length=813669
Score = 152 bits (168), Expect = 1e-31
Identities = 354/522 (68%), Gaps = 14/522 (3%)
Strand=Plus/Minus
Query 35180 ATTTTTGGACCCCAAATGAGGTTCTCTCTTCGAGACGACACTATTCCAGTTCTCACTACC 35239
||||||||| | || ||| | | || || |||| || | |||| | || || ||
Sbjct 304842 ATTTTTGGAGCACAGATGCGTTATTCCCTGAGAGAAAACGTTTTTCCTTTGCTTACAACA 304783
Query 35240 AAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGCAATACA 35299
|| | | || ||||||||||| || |||||| | |||||| || | ||| | |||
Sbjct 304782 AAAAGGGTATTTTGGAGAGGAGTGGTTGAAGAATTACTGTGGTTTATTAAGGGTAGCACA 304723
Query 35300 GACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCGCGGGAA 35359
| | ||||| | || |||| | | ||||| ||| | | ||| | || || ||
Sbjct 304722 AATTCAAAAGAGCTAGCAGAGAAAGATGTTCACATTTGGGATCCAAATAGTTCTCGAGAG 304663
Query 35360 TTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTATACGGA 35419
||| | || || ||| || | || || | ||| || ||||||||||| || || |||
Sbjct 304662 TTTCTAGATGGTTTAGGTTTTAAAGAAAGGGAAGAAGGCGATTTGGGACCTGTCTATGGA 304603
Query 35420 TTCCAATGGCGTCATTTTGGTGCTGAATAT-GATACCTGTTCTTCCGATTATACTGGAAA 35478
||||| ||| | || ||||| ||||||||| || || | | || || | ||| |
Sbjct 304602 TTCCAGTGGAGACACTTTGGGGCTGAATATAGAGGAATG-CATGCTGACTACAGTGGTGA 304544
Query 35479 GGGTATTGATCAATTGGCCAATATACT-AAAGACCCTGAGAGAAAATCCAGATGATAGAA 35537
|| ||||| ||| | ||| || | |||||| | || || |||||| | | | |
Sbjct 304543 AGGCATTGACCAACTAAATAATGTAATAAAAGACATTAAG-GACAATCCAAACAGTCGTA 304485
Query 35538 GGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTT--ATGGCTCTTCCTCCATG 35595
|||| |||||| || ||||| ||||| || | ||||| |||||||| ||||| ||
Sbjct 304484 GGATTATTATGTGTGCCTGGAACCCTATTGACAT--ACCTTTAATGGCTCTACCTCCTTG 304427
Query 35596 CCACATGAC-TGCTCAATTTTATGTGGCTAATGGAGAATTGTCGTGCCAGTTGTATCAGC 35654
|||| || | || || || | ||| || ||||||||| | || ||| |||||||
Sbjct 304426 CCAC-TGCCTTGTGCAGTTCTTTGTTGCAAATGGAGAACTTTCCTGCTTACTGTATCAAA 304368
Query 35655 GA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATATTGC 35694
|| ||| || ||| || | || ||||| |||||||||||
Sbjct 304367 GATCAGCTGATATG--GGTCTTGGAGTGCCATTCAATATTGC 304328
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989533435968540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |