Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq310 524 1e-143
seq12 315 9e-81
seq104 82.4 1e-10
>seq310
Length=366558
Score = 524 bits (580), Expect = 1e-143
Identities = 1234/1851 (67%), Gaps = 23/1851 (1%)
Strand=Plus/Plus
Query 62067 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 62126
|| ||||| || | || ||| ||||| || ||||| | || ||||||| ||||||
Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598
Query 62127 TGCATACTCGTTAGT--TTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGAC 62184
|| || || | | ||| ||| | || | | | ||||| ||||| | ||| || |
Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656
Query 62185 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGCAATTT 62244
| || || || |||||||| | ||||| ||||| |||| || || |||| |||||
Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716
Query 62245 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 62301
|||| | ||||||||| | || ||||| || |||| || |||| ||||| |
Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776
Query 62302 ATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 62361
| |||| || | | || | || || ||| | |||| ||| | | | ||| || |
Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCA 100836
Query 62362 AAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGT 62421
|| ||||||| | ||| |||| || || ||||||||||| || || | | || |
Sbjct 100837 AATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTAT 100896
Query 62422 AAATATTACTGGTATACGGTTCCACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 62481
| | ||| || || ||||| || || |||||||| ||||||||||| || ||||| |
Sbjct 100897 ATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAG 100956
Query 62482 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTT 62541
| || ||||| || || | | ||| |||||||| |||||| | ||||| |||
Sbjct 100957 CGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGCTT 101016
Query 62542 TTAGATGTTCCCAATTCCAAAGATCCGACGGTACAACANNNNNNNNNNNATATTGTAGAA 62601
| | | |||||| ||| | || | || | ||| |||| ||
Sbjct 101017 TCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAA 101076
Query 62602 TACCGTTACTGGC-GTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGT 62660
| || || || | | || | ||| |||| || ||| || || || ||||| || | |
Sbjct 101077 TCCCCTTGCTTACAGGACTA-CCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATT 101135
Query 62661 TTACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCT 62720
| ||| || || || | |||||||||||| | ||||| || || | | ||| || |
Sbjct 101136 TCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTTC 101195
Query 62721 TGTGCTTCCGGGCTATCAAATGGATAATTTAAG-AGAATAAACGCGTCCGCTAATCCTTG 62779
||||| ||||| ||| | | || ||| | |||||| || || ||||| |||||
Sbjct 101196 GCAGCTTCAGGGCTGTCATAAGC-TATACGAAGTAAAATAAAAGCATCGGCTAAACCTTG 101254
Query 62780 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 62839
||||| || || || ||||| || ||| ||| ||| ||| || ||||| | |||||
Sbjct 101255 TACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGATA 101314
Query 62840 ATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAG 62899
|||||||| || |||||||| || || ||| | || |||||| | || || |
Sbjct 101315 ATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTAA 101374
Query 62900 TTTGAGAAAATCAAA---TCGCCCATCTA---TTACAAACATGTTCAATGCAACAGATGC 62953
|| |||||| | | | ||| |||||||||| |||| ||||| |||||
Sbjct 101375 CTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGATGC 101434
Query 62954 CAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATT 63013
|| |||||| || || || || | || | ||||| | || || ||||| | |||
Sbjct 101435 CAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAATT 101494
Query 63014 ACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATA 63073
|| | | || |||||||| ||||||||||| || ||| |||| || ||||| |||||
Sbjct 101495 GCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTATA 101554
Query 63074 AAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCG 63133
|| ||||| ||||| |||||||| | ||||| | || || || | ||| | |
Sbjct 101555 TAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATTTCTG 101614
Query 63134 AGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAA 63193
||| || | ||| ||||| | | |||| ||| || |||||| |||| ||
Sbjct 101615 AGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTCAAA 101674
Query 63194 CTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTC 63253
|| ||||||||| || || | || ||||||| || |||||||||| ||||| |
Sbjct 101675 CTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCAGTG 101734
Query 63254 TCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATC 63313
|| | | | |||| ||||||||| | ||| || ||||| || || ||| | |||
Sbjct 101735 CCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAATC 101794
Query 63314 TCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATC 63373
||||| ||| || || ||||||||||| ||||| | || | || | | || ||
Sbjct 101795 TCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGTC 101854
Query 63374 AGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATC 63433
| |||||| ||||| | || || || | | | ||||| | ||||| ||||| |||||
Sbjct 101855 TGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGATC 101914
Query 63434 TATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACC 63493
|| ||||| || |||||| |||| | | ||| |||| | |||||| || | ||
Sbjct 101915 TACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGCC 101974
Query 63494 ATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCC 63553
||||| || | || | | || | ||||| ||||| | || || | ||
Sbjct 101975 GTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAAACC 102034
Query 63554 CCCTGCCATTTTAGAGATTAATGCGCATCGT--TTTAACGTGTCATAGATGCCTTCTATG 63611
|||||| |||||| || | || | | || | ||| | | | | |||||||| |||
Sbjct 102035 ACCTGCCGATTTAGAAATGAGAGCAC-TTGTAGTCAAACAT-TTACAAATGCCTTCAATG 102092
Query 63612 CTATCATCGATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGC 63670
|||||||| || || || || ||||| || | || | | || || || ||
Sbjct 102093 CTATCATCAGGCATTGCTACCAAG-AAACACGATGAAAGCTGAGGTCTTGTGGTCCCAGC 102151
Query 63671 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC 63730
|| | |||||| || || || || || || || | || ||||||||| ||
Sbjct 102152 TGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACGTTTC 102211
Query 63731 AATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTG 63790
|| || | |||||||| | ||||| || || || || ||||| | |||||| ||
Sbjct 102212 TATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGTGTTG 102271
Query 63791 AGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAA 63850
||||||||| || ||||| ||| | |||||| | || || ||| |||||||||||
Sbjct 102272 AGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTTTAAA 102331
Query 63851 ACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAG 63901
||||||||| ||||| ||||| || || || || | ||||| ||||| ||
Sbjct 102332 ACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAG 102382
>seq12
Length=2314596
Score = 315 bits (348), Expect = 9e-81
Identities = 613/900 (68%), Gaps = 9/900 (1%)
Strand=Plus/Minus
Query 33282 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 33341
||||| || ||||| |||||||| || ||||| || ||||| || || || ||
Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037
Query 33342 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAAT 33401
|| || || | ||| || ||||||||||| ||||||| ||||| || | | | |||||
Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977
Query 33402 TCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATT 33461
|| | | | || || || ||||| ||||| ||||| || ||||||||
Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917
Query 33462 CCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTT 33521
|| || || | || || | ||| |||| | |||||| |||||||| || ||||
Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857
Query 33522 GTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGT--AATAA-ATGTTTAAACATC 33578
|| ||| | | || |||| | | ||| | | || || || ||||||
Sbjct 281856 CGAATTATATCTGTTACTCGCTCTT---TTGATGGTTTTTGAACAATATAAGAAAACATT 281800
Query 33579 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTG 33638
||||| || ||||| || |||| ||| || || | | ||| | || |||||||| ||
Sbjct 281799 AAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTC 281740
Query 33639 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAG 33698
||||| ||||| || || || || || |||||||| || | ||| || ||| ||||||
Sbjct 281739 AGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAG 281680
Query 33699 AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA-TG 33757
|| |||||||| || || ||||| |||| || || ||| | || | | | ||
Sbjct 281679 AAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTG 281620
Query 33758 T--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCA 33815
||||| | |||||||||| |||||||| || ||||||||||| ||||| || |||
Sbjct 281619 CTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCA 281560
Query 33816 TTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATAC 33875
|| || ||| | | ||| || | || | |||||| || || | | |||||||
Sbjct 281559 TTGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATAC 281500
Query 33876 ATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTA 33935
||||| ||||| || ||||||||||| || || || || || || || | |||||| ||
Sbjct 281499 ATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTT 281440
Query 33936 ATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCT 33995
| || |||||| || |||| ||| | | |||||||| || ||||||||| ||
Sbjct 281439 ACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCA 281380
Query 33996 GCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAA 34055
|||||||| || | ||||||| || |||| |||| || || | |||| |||
Sbjct 281379 GCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAG 281320
Query 34056 TCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTT 34115
| | || ||||| | || |||||||| |||||| || || || || || |
Sbjct 281319 TGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCC 281260
Query 34116 TTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 34175
|| ||| | | ||| ||||| ||||||| || || || || || || || ||||||||
Sbjct 281259 TTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGGATTT 281200
>seq104
Length=1066031
Score = 82.4 bits (90), Expect = 1e-10
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 28088 TCCGTAAAGTAATTTCCTGTCCAATTTGATGTACCTATATACGCCGTTTTATCGGTTACC 28147
|| |||||||| | | | | ||||||||| || |||| ||| ||||| ||||||||||||
Sbjct 978 TCTGTAAAGTAGTCTGCCGACCAATTTGAAGTGCCTACATAAGCCGTATTATCGGTTACC 1037
Query 28148 ATATATTTTGCATGGTTTACCCTAGAATACGGAAT 28182
|||||||| || || || |||| |||||| ||
Sbjct 1038 ATATATTTATTGTGATTCACTCTAGCATACGGTAT 1072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629786203592640
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